Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RNF217Q8TC41 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 MIR3648-2-201ENST00000581792 180 ntBASIC22.37■■□□□ 1.17
RNF217Q8TC41 MIR3648-1-201ENST00000615959 180 ntBASIC22.37■■□□□ 1.17
RNF217Q8TC41 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RNF217Q8TC41 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RNF217Q8TC41 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 AC016575.1-201ENST00000607026 382 ntBASIC22.36■■□□□ 1.17
RNF217Q8TC41 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RNF217Q8TC41 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RNF217Q8TC41 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF217Q8TC41 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
RNF217Q8TC41 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF217Q8TC41 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF217Q8TC41 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF217Q8TC41 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF217Q8TC41 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF217Q8TC41 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF217Q8TC41 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF217Q8TC41 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF217Q8TC41 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
RNF217Q8TC41 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.34■■□□□ 1.17
RNF217Q8TC41 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF217Q8TC41 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF217Q8TC41 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF217Q8TC41 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF217Q8TC41 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
RNF217Q8TC41 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF217Q8TC41 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF217Q8TC41 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF217Q8TC41 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF217Q8TC41 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF217Q8TC41 MIR7108-201ENST00000614319 87 ntBASIC22.32■■□□□ 1.16
RNF217Q8TC41 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF217Q8TC41 DUSP8P4-201ENST00000399538 1761 ntBASIC22.32■■□□□ 1.16
RNF217Q8TC41 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF217Q8TC41 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF217Q8TC41 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF217Q8TC41 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF217Q8TC41 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF217Q8TC41 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF217Q8TC41 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF217Q8TC41 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF217Q8TC41 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF217Q8TC41 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF217Q8TC41 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 AL391422.3-201ENST00000603791 2761 ntBASIC22.29■■□□□ 1.16
RNF217Q8TC41 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF217Q8TC41 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF217Q8TC41 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF217Q8TC41 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 AC126177.7-201ENST00000547904 679 ntBASIC22.28■■□□□ 1.16
RNF217Q8TC41 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF217Q8TC41 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RNF217Q8TC41 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 ERN1-208ENST00000606895 2068 ntBASIC22.27■■□□□ 1.16
RNF217Q8TC41 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RNF217Q8TC41 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RNF217Q8TC41 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.27■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms