Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM2Q8N967 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM2Q8N967 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM2Q8N967 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRTM2Q8N967 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRTM2Q8N967 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM2Q8N967 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.28■□□□□ 0.68
LRTM2Q8N967 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM2Q8N967 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRTM2Q8N967 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM2Q8N967 ABCB10P4-201ENST00000566803 2184 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM2Q8N967 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM2Q8N967 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRTM2Q8N967 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM2Q8N967 AL162393.1-201ENST00000437852 946 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L13-201ENST00000554103 1267 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L15-201ENST00000611059 1267 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L23-201ENST00000615195 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L24-201ENST00000617576 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L22-201ENST00000618238 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L20-201ENST00000619712 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L21-201ENST00000622058 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L10-201ENST00000622460 1267 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 DUX4L25-201ENST00000624915 1269 ntBASIC19.27■□□□□ 0.68
LRTM2Q8N967 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRTM2Q8N967 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.27■□□□□ 0.67
LRTM2Q8N967 LINC01971-201ENST00000617888 1048 ntBASIC19.26■□□□□ 0.67
LRTM2Q8N967 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRTM2Q8N967 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.26■□□□□ 0.67
LRTM2Q8N967 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.25■□□□□ 0.67
LRTM2Q8N967 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM2Q8N967 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM2Q8N967 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM2Q8N967 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM2Q8N967 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM2Q8N967 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.24■□□□□ 0.67
LRTM2Q8N967 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.24■□□□□ 0.67
LRTM2Q8N967 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.24■□□□□ 0.67
LRTM2Q8N967 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM2Q8N967 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM2Q8N967 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.23■□□□□ 0.67
LRTM2Q8N967 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM2Q8N967 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM2Q8N967 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM2Q8N967 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.22■□□□□ 0.67
LRTM2Q8N967 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.22■□□□□ 0.67
LRTM2Q8N967 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.22■□□□□ 0.67
LRTM2Q8N967 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LRTM2Q8N967 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM2Q8N967 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRTM2Q8N967 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.21■□□□□ 0.67
LRTM2Q8N967 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.21■□□□□ 0.67
LRTM2Q8N967 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.21■□□□□ 0.67
LRTM2Q8N967 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM2Q8N967 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LRTM2Q8N967 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.2■□□□□ 0.66
LRTM2Q8N967 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.2■□□□□ 0.66
LRTM2Q8N967 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRTM2Q8N967 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRTM2Q8N967 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRTM2Q8N967 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LRTM2Q8N967 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM2Q8N967 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM2Q8N967 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM2Q8N967 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LRTM2Q8N967 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms