Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDDC2Q7Z4H3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
HDDC2Q7Z4H3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
HDDC2Q7Z4H3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HDDC2Q7Z4H3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
HDDC2Q7Z4H3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.27■■□□□ 1
HDDC2Q7Z4H3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.27■■□□□ 1
HDDC2Q7Z4H3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.27■■□□□ 1
HDDC2Q7Z4H3 AC026202.3-201ENST00000600805 1127 ntBASIC21.27■■□□□ 1
HDDC2Q7Z4H3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
HDDC2Q7Z4H3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HDDC2Q7Z4H3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
HDDC2Q7Z4H3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HDDC2Q7Z4H3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.26■□□□□ 0.99
HDDC2Q7Z4H3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HDDC2Q7Z4H3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HDDC2Q7Z4H3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HDDC2Q7Z4H3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.23■□□□□ 0.99
HDDC2Q7Z4H3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
HDDC2Q7Z4H3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
HDDC2Q7Z4H3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HDDC2Q7Z4H3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.22■□□□□ 0.99
HDDC2Q7Z4H3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 AC133552.2-201ENST00000619106 1032 ntBASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 AC012676.1-201ENST00000574705 1949 ntBASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 AC142381.3-201ENST00000568208 1670 ntBASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HDDC2Q7Z4H3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 AC009831.1-201ENST00000580420 1582 ntBASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 RARRES2P2-201ENST00000394842 485 ntBASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDDC2Q7Z4H3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDDC2Q7Z4H3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDDC2Q7Z4H3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HDDC2Q7Z4H3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms