Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 AL121603.2-201ENST00000557373 2117 ntBASIC21.34■■□□□ 1.01
TMEM53Q6P2H8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEM53Q6P2H8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM53Q6P2H8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TMEM53Q6P2H8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM53Q6P2H8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.33■■□□□ 1.01
TMEM53Q6P2H8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMEM53Q6P2H8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEM53Q6P2H8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM53Q6P2H8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.32■■□□□ 1
TMEM53Q6P2H8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM53Q6P2H8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TMEM53Q6P2H8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM53Q6P2H8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.31■■□□□ 1
TMEM53Q6P2H8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.31■■□□□ 1
TMEM53Q6P2H8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEM53Q6P2H8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM53Q6P2H8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.3■■□□□ 1
TMEM53Q6P2H8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM53Q6P2H8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM53Q6P2H8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEM53Q6P2H8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TMEM53Q6P2H8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TMEM53Q6P2H8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TMEM53Q6P2H8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TMEM53Q6P2H8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.28■■□□□ 1
TMEM53Q6P2H8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEM53Q6P2H8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM53Q6P2H8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.28■■□□□ 1
TMEM53Q6P2H8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM53Q6P2H8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.28■■□□□ 1
TMEM53Q6P2H8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.28■■□□□ 1
TMEM53Q6P2H8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM53Q6P2H8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TMEM53Q6P2H8 RNF165-205ENST00000588679 2904 ntBASIC21.28■■□□□ 1
TMEM53Q6P2H8 C9orf163-202ENST00000624034 2573 ntBASIC21.27■■□□□ 1
TMEM53Q6P2H8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEM53Q6P2H8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.27■■□□□ 1
TMEM53Q6P2H8 AC007029.1-201ENST00000604183 313 ntBASIC21.27■■□□□ 1
TMEM53Q6P2H8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.27■■□□□ 1
TMEM53Q6P2H8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 RP9P-202ENST00000450133 1212 ntBASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TMEM53Q6P2H8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 RARRES2P2-201ENST00000394842 485 ntBASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEM53Q6P2H8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEM53Q6P2H8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM53Q6P2H8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM53Q6P2H8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM53Q6P2H8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEM53Q6P2H8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEM53Q6P2H8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms