Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC093827.2-201ENST00000512654 315 ntBASIC27.51■■□□□ 1.99
COL13A1Q5TAT6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.51■■□□□ 1.99
COL13A1Q5TAT6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC27.51■■□□□ 1.99
COL13A1Q5TAT6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.5■■□□□ 1.99
COL13A1Q5TAT6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.5■■□□□ 1.99
COL13A1Q5TAT6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
COL13A1Q5TAT6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL13A1Q5TAT6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
COL13A1Q5TAT6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 TSPY20P-201ENST00000450910 630 ntBASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 AC008764.7-201ENST00000593779 1081 ntBASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL13A1Q5TAT6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.48■■□□□ 1.99
COL13A1Q5TAT6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
COL13A1Q5TAT6 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.48■■□□□ 1.99
COL13A1Q5TAT6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.48■■□□□ 1.99
COL13A1Q5TAT6 SF1-220ENST00000626028 704 ntTSL 2 BASIC27.48■■□□□ 1.99
COL13A1Q5TAT6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 DUX4L19-201ENST00000557448 1267 ntBASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
COL13A1Q5TAT6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
COL13A1Q5TAT6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
COL13A1Q5TAT6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL13A1Q5TAT6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
COL13A1Q5TAT6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.45■■□□□ 1.98
COL13A1Q5TAT6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.44■■□□□ 1.98
COL13A1Q5TAT6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.44■■□□□ 1.98
COL13A1Q5TAT6 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.44■■□□□ 1.98
COL13A1Q5TAT6 AC104771.1-201ENST00000603335 964 ntBASIC27.44■■□□□ 1.98
COL13A1Q5TAT6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.44■■□□□ 1.98
COL13A1Q5TAT6 KRT18P10-201ENST00000388836 1287 ntBASIC27.43■■□□□ 1.98
COL13A1Q5TAT6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
COL13A1Q5TAT6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL13A1Q5TAT6 YBX1P1-201ENST00000445822 960 ntBASIC27.42■■□□□ 1.98
COL13A1Q5TAT6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.42■■□□□ 1.98
COL13A1Q5TAT6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL13A1Q5TAT6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL13A1Q5TAT6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL13A1Q5TAT6 AC099791.1-201ENST00000416440 715 ntBASIC27.41■■□□□ 1.98
COL13A1Q5TAT6 CD99P1-205ENST00000527459 561 ntBASIC27.41■■□□□ 1.98
COL13A1Q5TAT6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.41■■□□□ 1.98
COL13A1Q5TAT6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL13A1Q5TAT6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.4■■□□□ 1.98
COL13A1Q5TAT6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC27.4■■□□□ 1.98
COL13A1Q5TAT6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 AL355802.2-201ENST00000402069 882 ntBASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.39■■□□□ 1.98
COL13A1Q5TAT6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.39■■□□□ 1.97
COL13A1Q5TAT6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.38■■□□□ 1.97
COL13A1Q5TAT6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL13A1Q5TAT6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.38■■□□□ 1.97
COL13A1Q5TAT6 SYT6-210ENST00000641643 1587 ntBASIC27.37■■□□□ 1.97
COL13A1Q5TAT6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.37■■□□□ 1.97
COL13A1Q5TAT6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 AC241377.3-202ENST00000626088 1088 ntBASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 AC241585.3-202ENST00000628937 1088 ntBASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL13A1Q5TAT6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL13A1Q5TAT6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.35■■□□□ 1.97
COL13A1Q5TAT6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
COL13A1Q5TAT6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.35■■□□□ 1.97
COL13A1Q5TAT6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.35■■□□□ 1.97
COL13A1Q5TAT6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL13A1Q5TAT6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.33■■□□□ 1.97
COL13A1Q5TAT6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 1073.7 ms