Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.46■■■□□ 2.15
NBPF9Q3BBW0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC28.45■■■□□ 2.14
NBPF9Q3BBW0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
NBPF9Q3BBW0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.44■■■□□ 2.14
NBPF9Q3BBW0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
NBPF9Q3BBW0 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.44■■■□□ 2.14
NBPF9Q3BBW0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
NBPF9Q3BBW0 AF131216.4-201ENST00000638924 1588 ntBASIC28.43■■■□□ 2.14
NBPF9Q3BBW0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
NBPF9Q3BBW0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
NBPF9Q3BBW0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
NBPF9Q3BBW0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
NBPF9Q3BBW0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.42■■■□□ 2.14
NBPF9Q3BBW0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
NBPF9Q3BBW0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF9Q3BBW0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.41■■■□□ 2.14
NBPF9Q3BBW0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF9Q3BBW0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NBPF9Q3BBW0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF9Q3BBW0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF9Q3BBW0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NBPF9Q3BBW0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.39■■■□□ 2.14
NBPF9Q3BBW0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 AC133561.4-201ENST00000566112 224 ntBASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
NBPF9Q3BBW0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NBPF9Q3BBW0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.36■■■□□ 2.13
NBPF9Q3BBW0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.34■■■□□ 2.13
NBPF9Q3BBW0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.33■■■□□ 2.13
NBPF9Q3BBW0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.33■■■□□ 2.13
NBPF9Q3BBW0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
NBPF9Q3BBW0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 ZNRF2P3-201ENST00000424200 374 ntBASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
NBPF9Q3BBW0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NBPF9Q3BBW0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.29■■■□□ 2.12
NBPF9Q3BBW0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NBPF9Q3BBW0 PBX2P1-201ENST00000493219 1291 ntBASIC28.28■■■□□ 2.12
NBPF9Q3BBW0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NBPF9Q3BBW0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NBPF9Q3BBW0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 AC106739.1-201ENST00000617035 715 ntBASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NBPF9Q3BBW0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.26■■■□□ 2.11
NBPF9Q3BBW0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
NBPF9Q3BBW0 FOXO3B-201ENST00000395675 1928 ntBASIC28.26■■■□□ 2.11
NBPF9Q3BBW0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms