Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PRTGQ2VWP7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRTGQ2VWP7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PRTGQ2VWP7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PRTGQ2VWP7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PRTGQ2VWP7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PRTGQ2VWP7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PRTGQ2VWP7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PRTGQ2VWP7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PRTGQ2VWP7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PRTGQ2VWP7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PRTGQ2VWP7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PRTGQ2VWP7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PRTGQ2VWP7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.44■■□□□ 1.18
PRTGQ2VWP7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PRTGQ2VWP7 AC120024.1-201ENST00000562672 995 ntBASIC22.44■■□□□ 1.18
PRTGQ2VWP7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.44■■□□□ 1.18
PRTGQ2VWP7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PRTGQ2VWP7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PRTGQ2VWP7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PRTGQ2VWP7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PRTGQ2VWP7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.42■■□□□ 1.18
PRTGQ2VWP7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PRTGQ2VWP7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PRTGQ2VWP7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PRTGQ2VWP7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PRTGQ2VWP7 AC009299.2-201ENST00000482477 511 ntBASIC22.41■■□□□ 1.18
PRTGQ2VWP7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.41■■□□□ 1.18
PRTGQ2VWP7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PRTGQ2VWP7 AL035685.1-201ENST00000636663 812 ntBASIC22.41■■□□□ 1.18
PRTGQ2VWP7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.41■■□□□ 1.18
PRTGQ2VWP7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PRTGQ2VWP7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 THA1P-201ENST00000590384 1145 ntBASIC22.4■■□□□ 1.18
PRTGQ2VWP7 AC011551.1-201ENST00000614101 683 ntBASIC22.4■■□□□ 1.18
PRTGQ2VWP7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PRTGQ2VWP7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PRTGQ2VWP7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PRTGQ2VWP7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.39■■□□□ 1.17
PRTGQ2VWP7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.38■■□□□ 1.17
PRTGQ2VWP7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.38■■□□□ 1.17
PRTGQ2VWP7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.38■■□□□ 1.17
PRTGQ2VWP7 SLC6A10P-202ENST00000431994 2058 ntBASIC22.38■■□□□ 1.17
PRTGQ2VWP7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PRTGQ2VWP7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRTGQ2VWP7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRTGQ2VWP7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRTGQ2VWP7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PRTGQ2VWP7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PRTGQ2VWP7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.36■■□□□ 1.17
PRTGQ2VWP7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PRTGQ2VWP7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PRTGQ2VWP7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.34■■□□□ 1.17
PRTGQ2VWP7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.34■■□□□ 1.17
PRTGQ2VWP7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PRTGQ2VWP7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PRTGQ2VWP7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRTGQ2VWP7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
PRTGQ2VWP7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.33■■□□□ 1.17
PRTGQ2VWP7 MIR4281-201ENST00000580852 62 ntBASIC22.33■■□□□ 1.17
PRTGQ2VWP7 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.33■■□□□ 1.17
PRTGQ2VWP7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PRTGQ2VWP7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PRTGQ2VWP7 AC090877.2-201ENST00000558441 1738 ntBASIC22.32■■□□□ 1.16
PRTGQ2VWP7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PRTGQ2VWP7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.32■■□□□ 1.16
PRTGQ2VWP7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
PRTGQ2VWP7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms