Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D28Q2M2D7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 AL592295.1-201ENST00000400984 884 ntBASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D28Q2M2D7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D28Q2M2D7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TBC1D28Q2M2D7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 AC022616.5-201ENST00000518796 181 ntBASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TBC1D28Q2M2D7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TBC1D28Q2M2D7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 SLC6A10P-202ENST00000431994 2058 ntBASIC20.45■□□□□ 0.86
TBC1D28Q2M2D7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TBC1D28Q2M2D7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 YBX1P4-201ENST00000392794 808 ntBASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TBC1D28Q2M2D7 AC020928.2-201ENST00000588717 2197 ntBASIC20.42■□□□□ 0.86
TBC1D28Q2M2D7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.42■□□□□ 0.86
TBC1D28Q2M2D7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TBC1D28Q2M2D7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 KRT8P33-201ENST00000508125 1423 ntBASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.41■□□□□ 0.86
TBC1D28Q2M2D7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TBC1D28Q2M2D7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms