Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDS5AQ29RF7 AL356441.2-201ENST00000443009 864 ntBASIC28.67■■■□□ 2.18
PDS5AQ29RF7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
PDS5AQ29RF7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC28.66■■■□□ 2.18
PDS5AQ29RF7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
PDS5AQ29RF7 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.66■■■□□ 2.18
PDS5AQ29RF7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PDS5AQ29RF7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.64■■■□□ 2.18
PDS5AQ29RF7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.64■■■□□ 2.18
PDS5AQ29RF7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
PDS5AQ29RF7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.64■■■□□ 2.17
PDS5AQ29RF7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.63■■■□□ 2.17
PDS5AQ29RF7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PDS5AQ29RF7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.63■■■□□ 2.17
PDS5AQ29RF7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PDS5AQ29RF7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PDS5AQ29RF7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PDS5AQ29RF7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PDS5AQ29RF7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PDS5AQ29RF7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PDS5AQ29RF7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PDS5AQ29RF7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
PDS5AQ29RF7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
PDS5AQ29RF7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.59■■■□□ 2.17
PDS5AQ29RF7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PDS5AQ29RF7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDS5AQ29RF7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.58■■■□□ 2.17
PDS5AQ29RF7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDS5AQ29RF7 UNC93B8-201ENST00000511903 705 ntBASIC28.58■■■□□ 2.17
PDS5AQ29RF7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.58■■■□□ 2.17
PDS5AQ29RF7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
PDS5AQ29RF7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDS5AQ29RF7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
PDS5AQ29RF7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.55■■■□□ 2.16
PDS5AQ29RF7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.55■■■□□ 2.16
PDS5AQ29RF7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
PDS5AQ29RF7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.55■■■□□ 2.16
PDS5AQ29RF7 DUSP8P4-201ENST00000399538 1761 ntBASIC28.55■■■□□ 2.16
PDS5AQ29RF7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 AC092028.1-203ENST00000608262 953 ntBASIC28.54■■■□□ 2.16
PDS5AQ29RF7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.54■■■□□ 2.16
PDS5AQ29RF7 AC090877.2-201ENST00000558441 1738 ntBASIC28.53■■■□□ 2.16
PDS5AQ29RF7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDS5AQ29RF7 AF131216.4-201ENST00000638924 1588 ntBASIC28.53■■■□□ 2.16
PDS5AQ29RF7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PDS5AQ29RF7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDS5AQ29RF7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.51■■■□□ 2.15
PDS5AQ29RF7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.51■■■□□ 2.15
PDS5AQ29RF7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
PDS5AQ29RF7 AC131212.1-201ENST00000613771 668 ntBASIC28.51■■■□□ 2.15
PDS5AQ29RF7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PDS5AQ29RF7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms