Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB5BP61020 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5BP61020 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5BP61020 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB5BP61020 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB5BP61020 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAB5BP61020 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 AC007375.3-201ENST00000600936 2314 ntBASIC18.55■□□□□ 0.56
RAB5BP61020 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB5BP61020 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAB5BP61020 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB5BP61020 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB5BP61020 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5BP61020 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB5BP61020 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB5BP61020 AC233723.2-201ENST00000623798 2106 ntBASIC18.54■□□□□ 0.56
RAB5BP61020 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB5BP61020 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5BP61020 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB5BP61020 AC010864.1-201ENST00000609407 1511 ntBASIC18.54■□□□□ 0.56
RAB5BP61020 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB5BP61020 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB5BP61020 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RAB5BP61020 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB5BP61020 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB5BP61020 AP002414.2-202ENST00000590929 1450 ntBASIC18.52■□□□□ 0.56
RAB5BP61020 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RAB5BP61020 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB5BP61020 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5BP61020 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB5BP61020 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5BP61020 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB5BP61020 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAB5BP61020 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.52■□□□□ 0.55
RAB5BP61020 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB5BP61020 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB5BP61020 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB5BP61020 AP004609.3-201ENST00000610705 1884 ntBASIC18.51■□□□□ 0.55
RAB5BP61020 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB5BP61020 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB5BP61020 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB5BP61020 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB5BP61020 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB5BP61020 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
RAB5BP61020 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RAB5BP61020 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5BP61020 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5BP61020 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5BP61020 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5BP61020 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB5BP61020 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB5BP61020 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.48■□□□□ 0.55
RAB5BP61020 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RAB5BP61020 AC127496.7-201ENST00000625110 1798 ntBASIC18.47■□□□□ 0.55
RAB5BP61020 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB5BP61020 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB5BP61020 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RAB5BP61020 AC010501.1-201ENST00000606270 1962 ntBASIC18.46■□□□□ 0.55
RAB5BP61020 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB5BP61020 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RAB5BP61020 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB5BP61020 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms