Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN12P56749 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CLDN12P56749 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CLDN12P56749 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 AC004812.2-201ENST00000611079 2094 ntBASIC20.45■□□□□ 0.86
CLDN12P56749 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLDN12P56749 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN12P56749 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CLDN12P56749 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN12P56749 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN12P56749 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN12P56749 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.44■□□□□ 0.86
CLDN12P56749 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN12P56749 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN12P56749 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN12P56749 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN12P56749 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN12P56749 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN12P56749 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLDN12P56749 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN12P56749 AC141586.4-201ENST00000624558 1573 ntBASIC20.42■□□□□ 0.86
CLDN12P56749 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN12P56749 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN12P56749 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN12P56749 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN12P56749 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.42■□□□□ 0.86
CLDN12P56749 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN12P56749 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLDN12P56749 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 ABCB10P4-201ENST00000566803 2184 ntBASIC20.41■□□□□ 0.86
CLDN12P56749 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLDN12P56749 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN12P56749 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN12P56749 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLDN12P56749 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLDN12P56749 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN12P56749 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN12P56749 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.39■□□□□ 0.86
CLDN12P56749 DUSP8P5-201ENST00000422884 1815 ntBASIC20.39■□□□□ 0.86
CLDN12P56749 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CLDN12P56749 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN12P56749 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN12P56749 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN12P56749 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN12P56749 DUX4L11-201ENST00000611504 1267 ntBASIC20.39■□□□□ 0.85
CLDN12P56749 DUX4L12-201ENST00000614593 1267 ntBASIC20.39■□□□□ 0.85
CLDN12P56749 DUX4L14-201ENST00000621227 1267 ntBASIC20.39■□□□□ 0.85
CLDN12P56749 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN12P56749 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN12P56749 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN12P56749 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN12P56749 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLDN12P56749 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN12P56749 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN12P56749 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.38■□□□□ 0.85
CLDN12P56749 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN12P56749 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN12P56749 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN12P56749 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN12P56749 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN12P56749 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN12P56749 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 C9orf163-202ENST00000624034 2573 ntBASIC20.37■□□□□ 0.85
CLDN12P56749 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLDN12P56749 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN12P56749 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN12P56749 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN12P56749 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN12P56749 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN12P56749 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN12P56749 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN12P56749 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN12P56749 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLDN12P56749 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN12P56749 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN12P56749 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN12P56749 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN12P56749 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms