Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXG1P55316 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
FOXG1P55316 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
FOXG1P55316 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
FOXG1P55316 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.8■□□□□ 0.92
FOXG1P55316 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXG1P55316 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXG1P55316 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.79■□□□□ 0.92
FOXG1P55316 AL451085.2-201ENST00000605085 799 ntBASIC20.79■□□□□ 0.92
FOXG1P55316 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
FOXG1P55316 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXG1P55316 SLC6A10P-202ENST00000431994 2058 ntBASIC20.78■□□□□ 0.92
FOXG1P55316 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXG1P55316 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXG1P55316 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXG1P55316 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.78■□□□□ 0.92
FOXG1P55316 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.78■□□□□ 0.92
FOXG1P55316 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.78■□□□□ 0.92
FOXG1P55316 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
FOXG1P55316 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXG1P55316 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
FOXG1P55316 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
FOXG1P55316 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FOXG1P55316 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.77■□□□□ 0.92
FOXG1P55316 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
FOXG1P55316 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 AL592295.1-201ENST00000400984 884 ntBASIC20.76■□□□□ 0.91
FOXG1P55316 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.76■□□□□ 0.91
FOXG1P55316 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.76■□□□□ 0.91
FOXG1P55316 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXG1P55316 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXG1P55316 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXG1P55316 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
FOXG1P55316 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
FOXG1P55316 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXG1P55316 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXG1P55316 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXG1P55316 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXG1P55316 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXG1P55316 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXG1P55316 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXG1P55316 AL031848.2-201ENST00000607670 837 ntBASIC20.73■□□□□ 0.91
FOXG1P55316 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FOXG1P55316 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXG1P55316 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXG1P55316 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXG1P55316 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXG1P55316 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXG1P55316 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXG1P55316 AC022616.5-201ENST00000518796 181 ntBASIC20.72■□□□□ 0.91
FOXG1P55316 AC120024.1-201ENST00000562672 995 ntBASIC20.72■□□□□ 0.91
FOXG1P55316 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXG1P55316 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
FOXG1P55316 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXG1P55316 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
FOXG1P55316 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXG1P55316 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXG1P55316 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXG1P55316 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXG1P55316 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXG1P55316 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXG1P55316 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXG1P55316 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXG1P55316 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXG1P55316 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXG1P55316 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXG1P55316 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXG1P55316 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXG1P55316 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXG1P55316 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXG1P55316 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXG1P55316 KRT18P24-201ENST00000344739 1156 ntBASIC20.68■□□□□ 0.9
FOXG1P55316 AC009299.2-201ENST00000482477 511 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms