Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL157400.5-201ENST00000507624 621 ntBASIC21.63■■□□□ 1.05
HMGA2P52926 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGA2P52926 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGA2P52926 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HMGA2P52926 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.62■■□□□ 1.05
HMGA2P52926 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HMGA2P52926 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.62■■□□□ 1.05
HMGA2P52926 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
HMGA2P52926 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGA2P52926 AC068473.5-201ENST00000616428 2072 ntBASIC21.61■■□□□ 1.05
HMGA2P52926 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.61■■□□□ 1.05
HMGA2P52926 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.61■■□□□ 1.05
HMGA2P52926 MIR3960-201ENST00000583311 91 ntBASIC21.61■■□□□ 1.05
HMGA2P52926 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.61■■□□□ 1.05
HMGA2P52926 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
HMGA2P52926 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGA2P52926 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
HMGA2P52926 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGA2P52926 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.6■■□□□ 1.05
HMGA2P52926 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGA2P52926 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGA2P52926 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGA2P52926 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGA2P52926 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGA2P52926 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HMGA2P52926 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGA2P52926 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.59■■□□□ 1.05
HMGA2P52926 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMGA2P52926 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGA2P52926 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HMGA2P52926 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
HMGA2P52926 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
HMGA2P52926 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.58■■□□□ 1.05
HMGA2P52926 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
HMGA2P52926 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGA2P52926 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.58■■□□□ 1.04
HMGA2P52926 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.58■■□□□ 1.04
HMGA2P52926 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGA2P52926 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGA2P52926 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGA2P52926 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HMGA2P52926 DUSP8P5-201ENST00000422884 1815 ntBASIC21.57■■□□□ 1.04
HMGA2P52926 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGA2P52926 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HMGA2P52926 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMGA2P52926 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGA2P52926 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HMGA2P52926 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.56■■□□□ 1.04
HMGA2P52926 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGA2P52926 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGA2P52926 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGA2P52926 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGA2P52926 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGA2P52926 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGA2P52926 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGA2P52926 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGA2P52926 SMPD5-203ENST00000639008 1464 ntBASIC21.55■■□□□ 1.04
HMGA2P52926 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGA2P52926 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGA2P52926 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGA2P52926 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGA2P52926 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGA2P52926 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGA2P52926 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGA2P52926 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGA2P52926 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGA2P52926 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGA2P52926 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.53■■□□□ 1.04
HMGA2P52926 AC060814.1-201ENST00000554326 538 ntBASIC21.53■■□□□ 1.04
HMGA2P52926 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HMGA2P52926 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
HMGA2P52926 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HMGA2P52926 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HMGA2P52926 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HMGA2P52926 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGA2P52926 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGA2P52926 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGA2P52926 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGA2P52926 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGA2P52926 ABHD17AP4-201ENST00000411545 909 ntBASIC21.52■■□□□ 1.04
HMGA2P52926 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms