Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LHX2P50458 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LHX2P50458 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.23■□□□□ 0.99
LHX2P50458 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LHX2P50458 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
LHX2P50458 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LHX2P50458 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LHX2P50458 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.23■□□□□ 0.99
LHX2P50458 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LHX2P50458 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LHX2P50458 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LHX2P50458 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.22■□□□□ 0.99
LHX2P50458 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LHX2P50458 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX2P50458 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX2P50458 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LHX2P50458 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.21■□□□□ 0.99
LHX2P50458 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
LHX2P50458 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LHX2P50458 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
LHX2P50458 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LHX2P50458 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LHX2P50458 AC011551.1-201ENST00000614101 683 ntBASIC21.2■□□□□ 0.98
LHX2P50458 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
LHX2P50458 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LHX2P50458 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LHX2P50458 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX2P50458 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX2P50458 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX2P50458 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LHX2P50458 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.19■□□□□ 0.98
LHX2P50458 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.19■□□□□ 0.98
LHX2P50458 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.19■□□□□ 0.98
LHX2P50458 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LHX2P50458 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.18■□□□□ 0.98
LHX2P50458 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.18■□□□□ 0.98
LHX2P50458 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.18■□□□□ 0.98
LHX2P50458 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.18■□□□□ 0.98
LHX2P50458 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.18■□□□□ 0.98
LHX2P50458 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LHX2P50458 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX2P50458 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LHX2P50458 Z92544.1-202ENST00000571933 1220 ntBASIC21.17■□□□□ 0.98
LHX2P50458 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LHX2P50458 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
LHX2P50458 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
LHX2P50458 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LHX2P50458 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LHX2P50458 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX2P50458 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LHX2P50458 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX2P50458 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX2P50458 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LHX2P50458 AC239859.2-201ENST00000444165 318 ntBASIC21.16■□□□□ 0.98
LHX2P50458 MIR4281-201ENST00000580852 62 ntBASIC21.16■□□□□ 0.98
LHX2P50458 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LHX2P50458 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.15■□□□□ 0.98
LHX2P50458 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LHX2P50458 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.15■□□□□ 0.98
LHX2P50458 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.15■□□□□ 0.98
LHX2P50458 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LHX2P50458 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LHX2P50458 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LHX2P50458 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LHX2P50458 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LHX2P50458 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.14■□□□□ 0.97
LHX2P50458 AC137630.3-201ENST00000607245 391 ntBASIC21.14■□□□□ 0.97
LHX2P50458 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.14■□□□□ 0.97
LHX2P50458 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LHX2P50458 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX2P50458 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX2P50458 GUSBP5-201ENST00000418136 578 ntBASIC21.13■□□□□ 0.97
LHX2P50458 BX664725.1-201ENST00000438252 379 ntBASIC21.13■□□□□ 0.97
LHX2P50458 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
LHX2P50458 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LHX2P50458 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.12■□□□□ 0.97
LHX2P50458 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LHX2P50458 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.12■□□□□ 0.97
LHX2P50458 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.12■□□□□ 0.97
LHX2P50458 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LHX2P50458 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.11■□□□□ 0.97
LHX2P50458 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LHX2P50458 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LHX2P50458 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.11■□□□□ 0.97
LHX2P50458 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.11■□□□□ 0.97
LHX2P50458 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.11■□□□□ 0.97
LHX2P50458 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.11■□□□□ 0.97
LHX2P50458 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.11■□□□□ 0.97
LHX2P50458 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms