Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS3P49746 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS3P49746 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 AP003733.4-201ENST00000623785 1697 ntBASIC19.33■□□□□ 0.69
THBS3P49746 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.33■□□□□ 0.69
THBS3P49746 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
THBS3P49746 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.33■□□□□ 0.68
THBS3P49746 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.33■□□□□ 0.68
THBS3P49746 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.33■□□□□ 0.68
THBS3P49746 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
THBS3P49746 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.33■□□□□ 0.68
THBS3P49746 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
THBS3P49746 AC093323.1-202ENST00000635031 2045 ntBASIC19.32■□□□□ 0.68
THBS3P49746 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS3P49746 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
THBS3P49746 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS3P49746 AC093536.1-201ENST00000569153 554 ntBASIC19.32■□□□□ 0.68
THBS3P49746 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
THBS3P49746 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
THBS3P49746 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
THBS3P49746 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
THBS3P49746 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.31■□□□□ 0.68
THBS3P49746 SLC6A10P-202ENST00000431994 2058 ntBASIC19.31■□□□□ 0.68
THBS3P49746 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
THBS3P49746 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
THBS3P49746 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
THBS3P49746 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
THBS3P49746 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 AC007029.1-201ENST00000604183 313 ntBASIC19.3■□□□□ 0.68
THBS3P49746 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 AL139125.2-201ENST00000623134 1869 ntBASIC19.3■□□□□ 0.68
THBS3P49746 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
THBS3P49746 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
THBS3P49746 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
THBS3P49746 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.29■□□□□ 0.68
THBS3P49746 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
THBS3P49746 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THBS3P49746 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.29■□□□□ 0.68
THBS3P49746 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.29■□□□□ 0.68
THBS3P49746 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.29■□□□□ 0.68
THBS3P49746 AC012354.3-201ENST00000623734 483 ntBASIC19.29■□□□□ 0.68
THBS3P49746 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
THBS3P49746 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.29■□□□□ 0.68
THBS3P49746 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
THBS3P49746 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS3P49746 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.28■□□□□ 0.68
THBS3P49746 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.28■□□□□ 0.68
THBS3P49746 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.28■□□□□ 0.68
THBS3P49746 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS3P49746 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS3P49746 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
THBS3P49746 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
THBS3P49746 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS3P49746 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.27■□□□□ 0.68
THBS3P49746 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.27■□□□□ 0.68
THBS3P49746 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THBS3P49746 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.27■□□□□ 0.68
THBS3P49746 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.27■□□□□ 0.68
THBS3P49746 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS3P49746 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.27■□□□□ 0.68
THBS3P49746 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
THBS3P49746 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
THBS3P49746 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.27■□□□□ 0.67
THBS3P49746 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
THBS3P49746 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.26■□□□□ 0.67
THBS3P49746 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
THBS3P49746 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.26■□□□□ 0.67
THBS3P49746 U85056.1-201ENST00000616429 682 ntBASIC19.26■□□□□ 0.67
THBS3P49746 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.26■□□□□ 0.67
THBS3P49746 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
THBS3P49746 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS3P49746 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
THBS3P49746 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THBS3P49746 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS3P49746 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms