Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A9P48067 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A9P48067 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC6A9P48067 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC6A9P48067 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC6A9P48067 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 AC133552.2-201ENST00000619106 1032 ntBASIC20.7■□□□□ 0.9
SLC6A9P48067 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC6A9P48067 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A9P48067 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A9P48067 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC6A9P48067 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLC6A9P48067 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A9P48067 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SLC6A9P48067 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A9P48067 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A9P48067 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A9P48067 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLC6A9P48067 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A9P48067 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A9P48067 AC009831.1-201ENST00000580420 1582 ntBASIC20.68■□□□□ 0.9
SLC6A9P48067 SLC6A10P-202ENST00000431994 2058 ntBASIC20.68■□□□□ 0.9
SLC6A9P48067 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A9P48067 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A9P48067 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SLC6A9P48067 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A9P48067 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A9P48067 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A9P48067 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC6A9P48067 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A9P48067 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A9P48067 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A9P48067 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A9P48067 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC6A9P48067 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC6A9P48067 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A9P48067 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A9P48067 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A9P48067 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A9P48067 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A9P48067 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A9P48067 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A9P48067 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SLC6A9P48067 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A9P48067 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SLC6A9P48067 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLC6A9P48067 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A9P48067 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC6A9P48067 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A9P48067 KRT18P10-201ENST00000388836 1287 ntBASIC20.64■□□□□ 0.89
SLC6A9P48067 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SLC6A9P48067 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SLC6A9P48067 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A9P48067 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A9P48067 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC6A9P48067 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC6A9P48067 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC6A9P48067 NTF6A-201ENST00000591175 560 ntBASIC20.63■□□□□ 0.89
SLC6A9P48067 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC6A9P48067 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC6A9P48067 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC6A9P48067 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A9P48067 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC6A9P48067 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLC6A9P48067 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLC6A9P48067 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A9P48067 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A9P48067 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A9P48067 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC6A9P48067 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC6A9P48067 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC6A9P48067 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A9P48067 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A9P48067 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
SLC6A9P48067 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC6A9P48067 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC6A9P48067 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC6A9P48067 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLC6A9P48067 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms