Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GDF1P27539 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GDF1P27539 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDF1P27539 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GDF1P27539 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDF1P27539 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.45■■□□□ 1.02
GDF1P27539 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.45■■□□□ 1.02
GDF1P27539 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GDF1P27539 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF1P27539 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF1P27539 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.44■■□□□ 1.02
GDF1P27539 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF1P27539 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
GDF1P27539 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.44■■□□□ 1.02
GDF1P27539 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GDF1P27539 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
GDF1P27539 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
GDF1P27539 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF1P27539 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.43■■□□□ 1.02
GDF1P27539 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.43■■□□□ 1.02
GDF1P27539 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF1P27539 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.43■■□□□ 1.02
GDF1P27539 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GDF1P27539 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.43■■□□□ 1.02
GDF1P27539 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GDF1P27539 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GDF1P27539 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF1P27539 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GDF1P27539 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
GDF1P27539 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GDF1P27539 AC091060.1-201ENST00000623524 1766 ntBASIC21.42■■□□□ 1.02
GDF1P27539 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.41■■□□□ 1.02
GDF1P27539 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.41■■□□□ 1.02
GDF1P27539 BX664725.1-201ENST00000438252 379 ntBASIC21.41■■□□□ 1.02
GDF1P27539 AC239859.2-201ENST00000444165 318 ntBASIC21.41■■□□□ 1.02
GDF1P27539 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
GDF1P27539 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.41■■□□□ 1.02
GDF1P27539 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GDF1P27539 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.41■■□□□ 1.02
GDF1P27539 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
GDF1P27539 DUSP8P4-201ENST00000399538 1761 ntBASIC21.41■■□□□ 1.02
GDF1P27539 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GDF1P27539 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.4■■□□□ 1.02
GDF1P27539 AC011551.1-201ENST00000614101 683 ntBASIC21.4■■□□□ 1.02
GDF1P27539 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GDF1P27539 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.4■■□□□ 1.02
GDF1P27539 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.4■■□□□ 1.02
GDF1P27539 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF1P27539 AC145676.1-201ENST00000514988 2004 ntBASIC21.39■■□□□ 1.02
GDF1P27539 KRT125P-201ENST00000546827 989 ntBASIC21.39■■□□□ 1.01
GDF1P27539 Z92544.1-202ENST00000571933 1220 ntBASIC21.39■■□□□ 1.01
GDF1P27539 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GDF1P27539 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
GDF1P27539 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF1P27539 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF1P27539 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
GDF1P27539 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF1P27539 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF1P27539 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.38■■□□□ 1.01
GDF1P27539 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
GDF1P27539 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
GDF1P27539 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF1P27539 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF1P27539 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.37■■□□□ 1.01
GDF1P27539 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GDF1P27539 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GDF1P27539 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
GDF1P27539 MIR4281-201ENST00000580852 62 ntBASIC21.37■■□□□ 1.01
GDF1P27539 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GDF1P27539 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.37■■□□□ 1.01
GDF1P27539 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF1P27539 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.36■■□□□ 1.01
GDF1P27539 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GDF1P27539 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF1P27539 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
GDF1P27539 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GDF1P27539 GUSBP5-201ENST00000418136 578 ntBASIC21.36■■□□□ 1.01
GDF1P27539 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.36■■□□□ 1.01
GDF1P27539 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF1P27539 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF1P27539 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF1P27539 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF1P27539 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.35■■□□□ 1.01
GDF1P27539 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF1P27539 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GDF1P27539 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF1P27539 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF1P27539 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GDF1P27539 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF1P27539 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GDF1P27539 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF1P27539 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
GDF1P27539 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.34■■□□□ 1.01
GDF1P27539 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms