Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
KCNA3P22001 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
KCNA3P22001 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.55■■■□□ 2.32
KCNA3P22001 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
KCNA3P22001 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
KCNA3P22001 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
KCNA3P22001 AC024257.2-201ENST00000549699 147 ntBASIC29.54■■■□□ 2.32
KCNA3P22001 ANKRD20A6P-201ENST00000618763 204 ntBASIC29.54■■■□□ 2.32
KCNA3P22001 AL355001.2-201ENST00000620617 1191 ntBASIC29.54■■■□□ 2.32
KCNA3P22001 AL136967.2-201ENST00000623968 743 ntBASIC29.54■■■□□ 2.32
KCNA3P22001 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
KCNA3P22001 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.54■■■□□ 2.32
KCNA3P22001 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
KCNA3P22001 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
KCNA3P22001 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
KCNA3P22001 MIR6821-201ENST00000617625 74 ntBASIC29.53■■■□□ 2.32
KCNA3P22001 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
KCNA3P22001 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
KCNA3P22001 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.52■■■□□ 2.32
KCNA3P22001 AC105265.2-201ENST00000467189 838 ntBASIC29.52■■■□□ 2.32
KCNA3P22001 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
KCNA3P22001 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
KCNA3P22001 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
KCNA3P22001 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.51■■■□□ 2.31
KCNA3P22001 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC29.51■■■□□ 2.31
KCNA3P22001 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
KCNA3P22001 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.5■■■□□ 2.31
KCNA3P22001 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.5■■■□□ 2.31
KCNA3P22001 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNA3P22001 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
KCNA3P22001 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
KCNA3P22001 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
KCNA3P22001 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
KCNA3P22001 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC29.48■■■□□ 2.31
KCNA3P22001 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
KCNA3P22001 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
KCNA3P22001 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.47■■■□□ 2.31
KCNA3P22001 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.47■■■□□ 2.31
KCNA3P22001 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
KCNA3P22001 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
KCNA3P22001 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
KCNA3P22001 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
KCNA3P22001 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
KCNA3P22001 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC29.45■■■□□ 2.31
KCNA3P22001 AC097381.1-201ENST00000429019 1296 ntBASIC29.45■■■□□ 2.31
KCNA3P22001 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.45■■■□□ 2.31
KCNA3P22001 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC29.45■■■□□ 2.31
KCNA3P22001 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
KCNA3P22001 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC29.44■■■□□ 2.3
KCNA3P22001 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
KCNA3P22001 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
KCNA3P22001 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
KCNA3P22001 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.43■■■□□ 2.3
KCNA3P22001 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.43■■■□□ 2.3
KCNA3P22001 SNX5-217ENST00000606557 1087 ntBASIC29.43■■■□□ 2.3
KCNA3P22001 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.43■■■□□ 2.3
KCNA3P22001 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
KCNA3P22001 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
KCNA3P22001 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
KCNA3P22001 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNA3P22001 AC087623.3-201ENST00000607047 1098 ntBASIC29.42■■■□□ 2.3
KCNA3P22001 MIR6722-201ENST00000617286 78 ntBASIC29.42■■■□□ 2.3
KCNA3P22001 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.42■■■□□ 2.3
KCNA3P22001 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
KCNA3P22001 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
KCNA3P22001 MIR939-201ENST00000401314 82 ntBASIC29.41■■■□□ 2.3
KCNA3P22001 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.41■■■□□ 2.3
KCNA3P22001 AF213884.3-201ENST00000563833 479 ntBASIC29.41■■■□□ 2.3
KCNA3P22001 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
KCNA3P22001 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.4■■■□□ 2.3
KCNA3P22001 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNA3P22001 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KCNA3P22001 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.4■■■□□ 2.3
KCNA3P22001 AL162430.1-201ENST00000480705 870 ntBASIC29.4■■■□□ 2.3
KCNA3P22001 STOX2-205ENST00000513034 807 ntTSL 3 BASIC29.39■■■□□ 2.3
KCNA3P22001 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.39■■■□□ 2.3
KCNA3P22001 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
KCNA3P22001 AC142472.1-201ENST00000612013 1741 ntBASIC29.38■■■□□ 2.29
KCNA3P22001 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNA3P22001 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.38■■■□□ 2.29
KCNA3P22001 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNA3P22001 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.38■■■□□ 2.29
KCNA3P22001 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNA3P22001 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNA3P22001 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KCNA3P22001 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29.37■■■□□ 2.29
KCNA3P22001 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNA3P22001 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.37■■■□□ 2.29
KCNA3P22001 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KCNA3P22001 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.36■■■□□ 2.29
KCNA3P22001 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KCNA3P22001 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KCNA3P22001 SRD5A1P1-201ENST00000442297 786 ntBASIC29.36■■■□□ 2.29
KCNA3P22001 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KCNA3P22001 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms