Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 AC007029.1-201ENST00000604183 313 ntBASIC21.16■□□□□ 0.98
HIST1H1CP16403 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.16■□□□□ 0.98
HIST1H1CP16403 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H1CP16403 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H1CP16403 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H1CP16403 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 LINC00543-201ENST00000567234 1845 ntBASIC21.15■□□□□ 0.98
HIST1H1CP16403 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H1CP16403 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
HIST1H1CP16403 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.14■□□□□ 0.98
HIST1H1CP16403 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
HIST1H1CP16403 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H1CP16403 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H1CP16403 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H1CP16403 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST1H1CP16403 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
HIST1H1CP16403 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HIST1H1CP16403 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST1H1CP16403 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.13■□□□□ 0.97
HIST1H1CP16403 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H1CP16403 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HIST1H1CP16403 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H1CP16403 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HIST1H1CP16403 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H1CP16403 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HIST1H1CP16403 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HIST1H1CP16403 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H1CP16403 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H1CP16403 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.11■□□□□ 0.97
HIST1H1CP16403 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
HIST1H1CP16403 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.11■□□□□ 0.97
HIST1H1CP16403 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.11■□□□□ 0.97
HIST1H1CP16403 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 MIR4449-201ENST00000578365 66 ntBASIC21.1■□□□□ 0.97
HIST1H1CP16403 RAP2CP1-202ENST00000605179 643 ntBASIC21.1■□□□□ 0.97
HIST1H1CP16403 MIR6089-201ENST00000616698 64 ntBASIC21.1■□□□□ 0.97
HIST1H1CP16403 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H1CP16403 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
HIST1H1CP16403 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1CP16403 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1CP16403 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1CP16403 GPX1-201ENST00000419349 1106 ntBASIC21.09■□□□□ 0.97
HIST1H1CP16403 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1CP16403 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H1CP16403 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST1H1CP16403 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H1CP16403 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H1CP16403 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST1H1CP16403 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.08■□□□□ 0.97
HIST1H1CP16403 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H1CP16403 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
HIST1H1CP16403 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.08■□□□□ 0.96
HIST1H1CP16403 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST1H1CP16403 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1CP16403 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1CP16403 AC141586.4-201ENST00000624558 1573 ntBASIC21.07■□□□□ 0.96
HIST1H1CP16403 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1CP16403 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1CP16403 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H1CP16403 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.07■□□□□ 0.96
HIST1H1CP16403 AC026202.3-201ENST00000600805 1127 ntBASIC21.07■□□□□ 0.96
HIST1H1CP16403 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HIST1H1CP16403 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.06■□□□□ 0.96
HIST1H1CP16403 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H1CP16403 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST1H1CP16403 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms