Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.28■□□□□ 0.84
CSF1P09603 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CSF1P09603 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSF1P09603 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CSF1P09603 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.28■□□□□ 0.84
CSF1P09603 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSF1P09603 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSF1P09603 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CSF1P09603 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSF1P09603 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSF1P09603 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.27■□□□□ 0.84
CSF1P09603 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSF1P09603 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.26■□□□□ 0.83
CSF1P09603 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.26■□□□□ 0.83
CSF1P09603 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSF1P09603 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSF1P09603 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CSF1P09603 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.24■□□□□ 0.83
CSF1P09603 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CSF1P09603 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSF1P09603 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CSF1P09603 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSF1P09603 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CSF1P09603 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.23■□□□□ 0.83
CSF1P09603 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.23■□□□□ 0.83
CSF1P09603 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSF1P09603 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSF1P09603 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSF1P09603 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.22■□□□□ 0.83
CSF1P09603 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CSF1P09603 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.22■□□□□ 0.83
CSF1P09603 RARRES2P2-201ENST00000394842 485 ntBASIC20.22■□□□□ 0.83
CSF1P09603 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSF1P09603 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSF1P09603 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CSF1P09603 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.21■□□□□ 0.83
CSF1P09603 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.2■□□□□ 0.82
CSF1P09603 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSF1P09603 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
CSF1P09603 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1P09603 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CSF1P09603 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1P09603 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 ABHD17AP5-201ENST00000580133 923 ntBASIC20.19■□□□□ 0.82
CSF1P09603 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.19■□□□□ 0.82
CSF1P09603 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CSF1P09603 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSF1P09603 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSF1P09603 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSF1P09603 SLC6A10P-202ENST00000431994 2058 ntBASIC20.18■□□□□ 0.82
CSF1P09603 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1P09603 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1P09603 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1P09603 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1P09603 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CSF1P09603 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1P09603 GPX1-201ENST00000419349 1106 ntBASIC20.18■□□□□ 0.82
CSF1P09603 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.18■□□□□ 0.82
CSF1P09603 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1P09603 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
CSF1P09603 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSF1P09603 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSF1P09603 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1P09603 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1P09603 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSF1P09603 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CSF1P09603 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CSF1P09603 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.17■□□□□ 0.82
CSF1P09603 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.17■□□□□ 0.82
CSF1P09603 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.17■□□□□ 0.82
CSF1P09603 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.17■□□□□ 0.82
CSF1P09603 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSF1P09603 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CSF1P09603 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.16■□□□□ 0.82
CSF1P09603 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 1074.7 ms