Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AL592295.1-201ENST00000400984 884 ntBASIC28.28■■■□□ 2.12
APPP05067 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
APPP05067 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APPP05067 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APPP05067 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
APPP05067 AC022616.5-201ENST00000518796 181 ntBASIC28.27■■■□□ 2.12
APPP05067 AC103724.3-201ENST00000564481 992 ntBASIC28.27■■■□□ 2.12
APPP05067 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
APPP05067 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
APPP05067 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
APPP05067 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.26■■■□□ 2.12
APPP05067 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APPP05067 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.26■■■□□ 2.11
APPP05067 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APPP05067 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APPP05067 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
APPP05067 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.25■■■□□ 2.11
APPP05067 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
APPP05067 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
APPP05067 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.25■■■□□ 2.11
APPP05067 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.25■■■□□ 2.11
APPP05067 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC28.25■■■□□ 2.11
APPP05067 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC28.25■■■□□ 2.11
APPP05067 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.25■■■□□ 2.11
APPP05067 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
APPP05067 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
APPP05067 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
APPP05067 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
APPP05067 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
APPP05067 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
APPP05067 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
APPP05067 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC28.24■■■□□ 2.11
APPP05067 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
APPP05067 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
APPP05067 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
APPP05067 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
APPP05067 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.22■■■□□ 2.11
APPP05067 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
APPP05067 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
APPP05067 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC28.21■■■□□ 2.11
APPP05067 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
APPP05067 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
APPP05067 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
APPP05067 AL031848.2-201ENST00000607670 837 ntBASIC28.21■■■□□ 2.11
APPP05067 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.21■■■□□ 2.11
APPP05067 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
APPP05067 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
APPP05067 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
APPP05067 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.2■■■□□ 2.11
APPP05067 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC28.2■■■□□ 2.1
APPP05067 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
APPP05067 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
APPP05067 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
APPP05067 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.19■■■□□ 2.1
APPP05067 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
APPP05067 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
APPP05067 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
APPP05067 SLC6A10P-202ENST00000431994 2058 ntBASIC28.19■■■□□ 2.1
APPP05067 AL451085.2-201ENST00000605085 799 ntBASIC28.18■■■□□ 2.1
APPP05067 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APPP05067 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
APPP05067 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.18■■■□□ 2.1
APPP05067 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.18■■■□□ 2.1
APPP05067 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
APPP05067 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
APPP05067 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
APPP05067 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
APPP05067 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.17■■■□□ 2.1
APPP05067 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
APPP05067 THA1P-201ENST00000590384 1145 ntBASIC28.16■■■□□ 2.1
APPP05067 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
APPP05067 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
APPP05067 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
APPP05067 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
APPP05067 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
APPP05067 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
APPP05067 AC120024.1-201ENST00000562672 995 ntBASIC28.15■■■□□ 2.1
APPP05067 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.15■■■□□ 2.1
APPP05067 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.15■■■□□ 2.1
APPP05067 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
APPP05067 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
APPP05067 KRT18P24-201ENST00000344739 1156 ntBASIC28.14■■■□□ 2.1
APPP05067 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
APPP05067 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
APPP05067 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.14■■■□□ 2.09
APPP05067 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.14■■■□□ 2.09
APPP05067 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
APPP05067 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
APPP05067 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC28.13■■■□□ 2.09
APPP05067 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.13■■■□□ 2.09
APPP05067 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
APPP05067 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
APPP05067 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
APPP05067 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms