Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
MT-CO3P00414 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.68■■□□□ 1.22
MT-CO3P00414 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
MT-CO3P00414 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MT-CO3P00414 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MT-CO3P00414 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
MT-CO3P00414 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
MT-CO3P00414 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MT-CO3P00414 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-CO3P00414 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-CO3P00414 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-CO3P00414 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-CO3P00414 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MT-CO3P00414 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.66■■□□□ 1.22
MT-CO3P00414 AF131216.4-201ENST00000638924 1588 ntBASIC22.66■■□□□ 1.22
MT-CO3P00414 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
MT-CO3P00414 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-CO3P00414 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-CO3P00414 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MT-CO3P00414 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MT-CO3P00414 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
MT-CO3P00414 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MT-CO3P00414 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
MT-CO3P00414 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-CO3P00414 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.64■■□□□ 1.21
MT-CO3P00414 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-CO3P00414 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MT-CO3P00414 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MT-CO3P00414 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.64■■□□□ 1.21
MT-CO3P00414 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-CO3P00414 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
MT-CO3P00414 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-CO3P00414 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-CO3P00414 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
MT-CO3P00414 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.63■■□□□ 1.21
MT-CO3P00414 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
MT-CO3P00414 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.63■■□□□ 1.21
MT-CO3P00414 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MT-CO3P00414 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-CO3P00414 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MT-CO3P00414 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MT-CO3P00414 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MT-CO3P00414 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.62■■□□□ 1.21
MT-CO3P00414 PBX2P1-201ENST00000493219 1291 ntBASIC22.62■■□□□ 1.21
MT-CO3P00414 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.62■■□□□ 1.21
MT-CO3P00414 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.62■■□□□ 1.21
MT-CO3P00414 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
MT-CO3P00414 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.61■■□□□ 1.21
MT-CO3P00414 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.61■■□□□ 1.21
MT-CO3P00414 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.61■■□□□ 1.21
MT-CO3P00414 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.6■■□□□ 1.21
MT-CO3P00414 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.6■■□□□ 1.21
MT-CO3P00414 AC106739.1-201ENST00000617035 715 ntBASIC22.6■■□□□ 1.21
MT-CO3P00414 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
MT-CO3P00414 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
MT-CO3P00414 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MT-CO3P00414 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-CO3P00414 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MT-CO3P00414 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.59■■□□□ 1.21
MT-CO3P00414 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-CO3P00414 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MT-CO3P00414 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MT-CO3P00414 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.58■■□□□ 1.2
MT-CO3P00414 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.58■■□□□ 1.2
MT-CO3P00414 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MT-CO3P00414 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-CO3P00414 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-CO3P00414 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-CO3P00414 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.57■■□□□ 1.2
MT-CO3P00414 ZNRF2P3-201ENST00000424200 374 ntBASIC22.57■■□□□ 1.2
MT-CO3P00414 AC142381.2-201ENST00000566120 298 ntBASIC22.57■■□□□ 1.2
MT-CO3P00414 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MT-CO3P00414 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MT-CO3P00414 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
MT-CO3P00414 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MT-CO3P00414 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
MT-CO3P00414 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.56■■□□□ 1.2
MT-CO3P00414 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MT-CO3P00414 FOXO3B-201ENST00000395675 1928 ntBASIC22.55■■□□□ 1.2
MT-CO3P00414 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
MT-CO3P00414 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MT-CO3P00414 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MT-CO3P00414 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.55■■□□□ 1.2
MT-CO3P00414 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.55■■□□□ 1.2
MT-CO3P00414 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MT-CO3P00414 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-CO3P00414 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MT-CO3P00414 UNC93B3-201ENST00000308076 687 ntBASIC22.54■■□□□ 1.2
MT-CO3P00414 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.54■■□□□ 1.2
MT-CO3P00414 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.54■■□□□ 1.2
MT-CO3P00414 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MT-CO3P00414 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MT-CO3P00414 MIR6722-201ENST00000617286 78 ntBASIC22.54■■□□□ 1.2
MT-CO3P00414 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.54■■□□□ 1.2
MT-CO3P00414 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-CO3P00414 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MT-CO3P00414 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.53■■□□□ 1.2
MT-CO3P00414 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
MT-CO3P00414 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MT-CO3P00414 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms