Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
USP1O94782 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP1O94782 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.82■■□□□ 1.4
USP1O94782 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP1O94782 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP1O94782 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP1O94782 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.81■■□□□ 1.4
USP1O94782 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP1O94782 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP1O94782 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP1O94782 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.81■■□□□ 1.4
USP1O94782 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.81■■□□□ 1.4
USP1O94782 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.81■■□□□ 1.4
USP1O94782 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
USP1O94782 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP1O94782 AC026202.3-201ENST00000600805 1127 ntBASIC23.8■■□□□ 1.4
USP1O94782 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP1O94782 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
USP1O94782 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP1O94782 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.79■■□□□ 1.4
USP1O94782 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
USP1O94782 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
USP1O94782 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.78■■□□□ 1.4
USP1O94782 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP1O94782 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP1O94782 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.78■■□□□ 1.4
USP1O94782 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP1O94782 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP1O94782 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP1O94782 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.77■■□□□ 1.4
USP1O94782 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP1O94782 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
USP1O94782 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
USP1O94782 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP1O94782 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.75■■□□□ 1.39
USP1O94782 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
USP1O94782 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 KRT18P10-201ENST00000388836 1287 ntBASIC23.75■■□□□ 1.39
USP1O94782 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.75■■□□□ 1.39
USP1O94782 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 LINC01124-201ENST00000409786 2117 ntBASIC23.75■■□□□ 1.39
USP1O94782 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.75■■□□□ 1.39
USP1O94782 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP1O94782 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP1O94782 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP1O94782 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP1O94782 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.74■■□□□ 1.39
USP1O94782 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.74■■□□□ 1.39
USP1O94782 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP1O94782 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
USP1O94782 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.74■■□□□ 1.39
USP1O94782 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.73■■□□□ 1.39
USP1O94782 MIR6089-201ENST00000616698 64 ntBASIC23.73■■□□□ 1.39
USP1O94782 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP1O94782 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.73■■□□□ 1.39
USP1O94782 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 RNF126P1-201ENST00000567452 1320 ntBASIC23.72■■□□□ 1.39
USP1O94782 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.72■■□□□ 1.39
USP1O94782 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.72■■□□□ 1.39
USP1O94782 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USP1O94782 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP1O94782 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP1O94782 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP1O94782 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP1O94782 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USP1O94782 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP1O94782 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP1O94782 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
USP1O94782 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP1O94782 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
USP1O94782 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USP1O94782 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
USP1O94782 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
USP1O94782 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USP1O94782 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms