Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RPP40O75818 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.31■■□□□ 1.48
RPP40O75818 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
RPP40O75818 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.31■■□□□ 1.48
RPP40O75818 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RPP40O75818 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
RPP40O75818 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RPP40O75818 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RPP40O75818 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RPP40O75818 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.29■■□□□ 1.48
RPP40O75818 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPP40O75818 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPP40O75818 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RPP40O75818 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RPP40O75818 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.28■■□□□ 1.48
RPP40O75818 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.28■■□□□ 1.48
RPP40O75818 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.28■■□□□ 1.48
RPP40O75818 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RPP40O75818 ERN1-208ENST00000606895 2068 ntBASIC24.27■■□□□ 1.48
RPP40O75818 MIR638-201ENST00000385237 100 ntBASIC24.27■■□□□ 1.48
RPP40O75818 KRT18P10-201ENST00000388836 1287 ntBASIC24.27■■□□□ 1.48
RPP40O75818 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RPP40O75818 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.26■■□□□ 1.47
RPP40O75818 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RPP40O75818 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
RPP40O75818 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
RPP40O75818 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RPP40O75818 AC010501.1-201ENST00000606270 1962 ntBASIC24.25■■□□□ 1.47
RPP40O75818 KRT18P24-201ENST00000344739 1156 ntBASIC24.25■■□□□ 1.47
RPP40O75818 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.25■■□□□ 1.47
RPP40O75818 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RPP40O75818 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
RPP40O75818 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.24■■□□□ 1.47
RPP40O75818 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
RPP40O75818 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RPP40O75818 TSPY9P-201ENST00000440215 945 ntBASIC24.24■■□□□ 1.47
RPP40O75818 TSPY11P-201ENST00000442607 1045 ntBASIC24.24■■□□□ 1.47
RPP40O75818 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.24■■□□□ 1.47
RPP40O75818 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.24■■□□□ 1.47
RPP40O75818 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RPP40O75818 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.24■■□□□ 1.47
RPP40O75818 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RPP40O75818 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RPP40O75818 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RPP40O75818 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RPP40O75818 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
RPP40O75818 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.22■■□□□ 1.47
RPP40O75818 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP40O75818 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP40O75818 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RPP40O75818 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.22■■□□□ 1.47
RPP40O75818 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
RPP40O75818 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RPP40O75818 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.21■■□□□ 1.47
RPP40O75818 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.21■■□□□ 1.47
RPP40O75818 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.21■■□□□ 1.47
RPP40O75818 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RPP40O75818 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RPP40O75818 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RPP40O75818 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.2■■□□□ 1.46
RPP40O75818 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RPP40O75818 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.2■■□□□ 1.46
RPP40O75818 AL139246.5-201ENST00000606645 996 ntBASIC24.2■■□□□ 1.46
RPP40O75818 AC137630.3-201ENST00000607245 391 ntBASIC24.2■■□□□ 1.46
RPP40O75818 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPP40O75818 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
RPP40O75818 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RPP40O75818 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RPP40O75818 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.19■■□□□ 1.46
RPP40O75818 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RPP40O75818 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.18■■□□□ 1.46
RPP40O75818 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RPP40O75818 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.18■■□□□ 1.46
RPP40O75818 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.18■■□□□ 1.46
RPP40O75818 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.18■■□□□ 1.46
RPP40O75818 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.18■■□□□ 1.46
RPP40O75818 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RPP40O75818 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RPP40O75818 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RPP40O75818 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.17■■□□□ 1.46
RPP40O75818 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.17■■□□□ 1.46
RPP40O75818 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.17■■□□□ 1.46
RPP40O75818 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RPP40O75818 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RPP40O75818 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms