Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLN5O75503 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLN5O75503 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLN5O75503 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN5O75503 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLN5O75503 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLN5O75503 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CLN5O75503 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.02■□□□□ 0.64
CLN5O75503 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CLN5O75503 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLN5O75503 AL359258.2-201ENST00000564063 1566 ntBASIC19.02■□□□□ 0.63
CLN5O75503 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLN5O75503 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19■□□□□ 0.63
CLN5O75503 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19■□□□□ 0.63
CLN5O75503 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 ABHD17AP4-201ENST00000411545 909 ntBASIC19■□□□□ 0.63
CLN5O75503 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19■□□□□ 0.63
CLN5O75503 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLN5O75503 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLN5O75503 AC010501.1-201ENST00000606270 1962 ntBASIC18.99■□□□□ 0.63
CLN5O75503 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLN5O75503 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLN5O75503 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLN5O75503 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.99■□□□□ 0.63
CLN5O75503 CR559946.2-201ENST00000623684 991 ntBASIC18.99■□□□□ 0.63
CLN5O75503 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.99■□□□□ 0.63
CLN5O75503 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CLN5O75503 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CLN5O75503 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLN5O75503 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CLN5O75503 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLN5O75503 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.98■□□□□ 0.63
CLN5O75503 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLN5O75503 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CLN5O75503 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.98■□□□□ 0.63
CLN5O75503 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLN5O75503 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CLN5O75503 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLN5O75503 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN5O75503 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.96■□□□□ 0.63
CLN5O75503 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLN5O75503 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.96■□□□□ 0.63
CLN5O75503 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLN5O75503 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.95■□□□□ 0.62
CLN5O75503 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLN5O75503 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN5O75503 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.94■□□□□ 0.62
CLN5O75503 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLN5O75503 AC126177.7-201ENST00000547904 679 ntBASIC18.94■□□□□ 0.62
CLN5O75503 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLN5O75503 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN5O75503 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLN5O75503 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.94■□□□□ 0.62
CLN5O75503 AL359504.2-201ENST00000605506 1601 ntBASIC18.93■□□□□ 0.62
CLN5O75503 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CLN5O75503 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN5O75503 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN5O75503 MIR3648-2-201ENST00000581792 180 ntBASIC18.93■□□□□ 0.62
CLN5O75503 MIR3648-1-201ENST00000615959 180 ntBASIC18.93■□□□□ 0.62
CLN5O75503 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.93■□□□□ 0.62
CLN5O75503 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN5O75503 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLN5O75503 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.93■□□□□ 0.62
CLN5O75503 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.93■□□□□ 0.62
CLN5O75503 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLN5O75503 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLN5O75503 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLN5O75503 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms