Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CPNE3O75131 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.56■■□□□ 1.2
CPNE3O75131 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.56■■□□□ 1.2
CPNE3O75131 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.55■■□□□ 1.2
CPNE3O75131 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CPNE3O75131 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE3O75131 AL356441.2-201ENST00000443009 864 ntBASIC22.55■■□□□ 1.2
CPNE3O75131 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CPNE3O75131 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE3O75131 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.55■■□□□ 1.2
CPNE3O75131 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.55■■□□□ 1.2
CPNE3O75131 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE3O75131 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPNE3O75131 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.54■■□□□ 1.2
CPNE3O75131 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CPNE3O75131 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPNE3O75131 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
CPNE3O75131 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CPNE3O75131 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE3O75131 MIR4787-201ENST00000607364 84 ntBASIC22.53■■□□□ 1.2
CPNE3O75131 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE3O75131 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.53■■□□□ 1.2
CPNE3O75131 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPNE3O75131 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE3O75131 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE3O75131 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPNE3O75131 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CPNE3O75131 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.52■■□□□ 1.2
CPNE3O75131 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE3O75131 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPNE3O75131 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.51■■□□□ 1.19
CPNE3O75131 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.51■■□□□ 1.19
CPNE3O75131 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE3O75131 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE3O75131 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.5■■□□□ 1.19
CPNE3O75131 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE3O75131 AC137630.3-201ENST00000607245 391 ntBASIC22.5■■□□□ 1.19
CPNE3O75131 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.5■■□□□ 1.19
CPNE3O75131 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE3O75131 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CPNE3O75131 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPNE3O75131 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE3O75131 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE3O75131 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.49■■□□□ 1.19
CPNE3O75131 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.49■■□□□ 1.19
CPNE3O75131 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CPNE3O75131 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CPNE3O75131 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE3O75131 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE3O75131 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CPNE3O75131 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CPNE3O75131 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.48■■□□□ 1.19
CPNE3O75131 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.48■■□□□ 1.19
CPNE3O75131 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 AC011551.1-201ENST00000614101 683 ntBASIC22.48■■□□□ 1.19
CPNE3O75131 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CPNE3O75131 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CPNE3O75131 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.48■■□□□ 1.19
CPNE3O75131 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.47■■□□□ 1.19
CPNE3O75131 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.47■■□□□ 1.19
CPNE3O75131 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.47■■□□□ 1.19
CPNE3O75131 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.47■■□□□ 1.19
CPNE3O75131 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE3O75131 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
CPNE3O75131 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.47■■□□□ 1.19
CPNE3O75131 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE3O75131 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CPNE3O75131 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CPNE3O75131 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE3O75131 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CPNE3O75131 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CPNE3O75131 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.46■■□□□ 1.19
CPNE3O75131 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.46■■□□□ 1.19
CPNE3O75131 MIR4281-201ENST00000580852 62 ntBASIC22.46■■□□□ 1.19
CPNE3O75131 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.46■■□□□ 1.19
CPNE3O75131 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CPNE3O75131 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
CPNE3O75131 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
CPNE3O75131 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.45■■□□□ 1.18
CPNE3O75131 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CPNE3O75131 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.45■■□□□ 1.18
CPNE3O75131 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 AC021242.3-201ENST00000607598 1377 ntBASIC22.45■■□□□ 1.18
CPNE3O75131 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.45■■□□□ 1.18
CPNE3O75131 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.45■■□□□ 1.18
CPNE3O75131 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CPNE3O75131 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms