Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
XRCC2O43543 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
XRCC2O43543 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
XRCC2O43543 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
XRCC2O43543 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.44■□□□□ 0.86
XRCC2O43543 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.44■□□□□ 0.86
XRCC2O43543 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.43■□□□□ 0.86
XRCC2O43543 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.43■□□□□ 0.86
XRCC2O43543 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.43■□□□□ 0.86
XRCC2O43543 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
XRCC2O43543 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.42■□□□□ 0.86
XRCC2O43543 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.42■□□□□ 0.86
XRCC2O43543 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
XRCC2O43543 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC2O43543 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC2O43543 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC2O43543 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.42■□□□□ 0.86
XRCC2O43543 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC2O43543 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC2O43543 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC2O43543 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.41■□□□□ 0.86
XRCC2O43543 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.41■□□□□ 0.86
XRCC2O43543 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC2O43543 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.41■□□□□ 0.86
XRCC2O43543 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC2O43543 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC2O43543 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC2O43543 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.4■□□□□ 0.86
XRCC2O43543 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.4■□□□□ 0.86
XRCC2O43543 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC2O43543 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
XRCC2O43543 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XRCC2O43543 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.39■□□□□ 0.86
XRCC2O43543 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
XRCC2O43543 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
XRCC2O43543 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
XRCC2O43543 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.39■□□□□ 0.85
XRCC2O43543 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
XRCC2O43543 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC2O43543 AC093323.1-202ENST00000635031 2045 ntBASIC20.38■□□□□ 0.85
XRCC2O43543 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC2O43543 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC2O43543 RPS2P7-201ENST00000447334 885 ntBASIC20.38■□□□□ 0.85
XRCC2O43543 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
XRCC2O43543 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.38■□□□□ 0.85
XRCC2O43543 MIR6765-201ENST00000614092 87 ntBASIC20.38■□□□□ 0.85
XRCC2O43543 U85056.1-201ENST00000616429 682 ntBASIC20.38■□□□□ 0.85
XRCC2O43543 MIR6089-201ENST00000616698 64 ntBASIC20.38■□□□□ 0.85
XRCC2O43543 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC2O43543 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC2O43543 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC2O43543 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC2O43543 FOXO3B-201ENST00000395675 1928 ntBASIC20.37■□□□□ 0.85
XRCC2O43543 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC2O43543 ABHD17AP5-201ENST00000580133 923 ntBASIC20.37■□□□□ 0.85
XRCC2O43543 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC2O43543 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC2O43543 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC2O43543 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC2O43543 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.36■□□□□ 0.85
XRCC2O43543 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC2O43543 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 SPCS2P3-201ENST00000500401 656 ntBASIC20.36■□□□□ 0.85
XRCC2O43543 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC2O43543 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC2O43543 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
XRCC2O43543 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC2O43543 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC2O43543 AL139125.2-201ENST00000623134 1869 ntBASIC20.35■□□□□ 0.85
XRCC2O43543 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC2O43543 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
XRCC2O43543 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.35■□□□□ 0.85
XRCC2O43543 DUX4L9-201ENST00000449051 1259 ntBASIC20.35■□□□□ 0.85
XRCC2O43543 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
XRCC2O43543 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC2O43543 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC2O43543 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
XRCC2O43543 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC2O43543 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.34■□□□□ 0.85
XRCC2O43543 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.34■□□□□ 0.85
XRCC2O43543 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC2O43543 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.33■□□□□ 0.85
XRCC2O43543 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
XRCC2O43543 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XRCC2O43543 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC2O43543 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC2O43543 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC2O43543 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC2O43543 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms