Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ATP2A1O14983 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
ATP2A1O14983 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.23■■□□□ 1.95
ATP2A1O14983 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ATP2A1O14983 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.22■■□□□ 1.95
ATP2A1O14983 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP2A1O14983 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.22■■□□□ 1.95
ATP2A1O14983 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP2A1O14983 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATP2A1O14983 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP2A1O14983 TSPY9P-201ENST00000440215 945 ntBASIC27.21■■□□□ 1.95
ATP2A1O14983 TSPY11P-201ENST00000442607 1045 ntBASIC27.21■■□□□ 1.95
ATP2A1O14983 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ATP2A1O14983 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.21■■□□□ 1.95
ATP2A1O14983 FOXO3B-201ENST00000395675 1928 ntBASIC27.2■■□□□ 1.95
ATP2A1O14983 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.2■■□□□ 1.94
ATP2A1O14983 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ATP2A1O14983 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.2■■□□□ 1.94
ATP2A1O14983 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
ATP2A1O14983 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.2■■□□□ 1.94
ATP2A1O14983 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ATP2A1O14983 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
ATP2A1O14983 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
ATP2A1O14983 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ATP2A1O14983 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ATP2A1O14983 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATP2A1O14983 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.18■■□□□ 1.94
ATP2A1O14983 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
ATP2A1O14983 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.18■■□□□ 1.94
ATP2A1O14983 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATP2A1O14983 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ATP2A1O14983 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.17■■□□□ 1.94
ATP2A1O14983 AC008406.3-201ENST00000620001 1374 ntBASIC27.17■■□□□ 1.94
ATP2A1O14983 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
ATP2A1O14983 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP2A1O14983 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP2A1O14983 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP2A1O14983 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.16■■□□□ 1.94
ATP2A1O14983 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP2A1O14983 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ATP2A1O14983 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.15■■□□□ 1.94
ATP2A1O14983 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.15■■□□□ 1.94
ATP2A1O14983 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
ATP2A1O14983 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ATP2A1O14983 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.15■■□□□ 1.94
ATP2A1O14983 AC096887.2-201ENST00000623443 1957 ntBASIC27.15■■□□□ 1.94
ATP2A1O14983 AF131216.4-201ENST00000638924 1588 ntBASIC27.14■■□□□ 1.94
ATP2A1O14983 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
ATP2A1O14983 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
ATP2A1O14983 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.14■■□□□ 1.94
ATP2A1O14983 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.14■■□□□ 1.94
ATP2A1O14983 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.14■■□□□ 1.94
ATP2A1O14983 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ATP2A1O14983 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ATP2A1O14983 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ATP2A1O14983 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
ATP2A1O14983 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.13■■□□□ 1.93
ATP2A1O14983 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.13■■□□□ 1.93
ATP2A1O14983 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
ATP2A1O14983 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.12■■□□□ 1.93
ATP2A1O14983 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.12■■□□□ 1.93
ATP2A1O14983 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ATP2A1O14983 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
ATP2A1O14983 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.11■■□□□ 1.93
ATP2A1O14983 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.11■■□□□ 1.93
ATP2A1O14983 AC010997.5-201ENST00000609182 354 ntBASIC27.11■■□□□ 1.93
ATP2A1O14983 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.11■■□□□ 1.93
ATP2A1O14983 AC019069.1-201ENST00000610008 1333 ntBASIC27.11■■□□□ 1.93
ATP2A1O14983 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.11■■□□□ 1.93
ATP2A1O14983 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ATP2A1O14983 AC097639.1-201ENST00000565519 1891 ntBASIC27.1■■□□□ 1.93
ATP2A1O14983 ERN1-208ENST00000606895 2068 ntBASIC27.09■■□□□ 1.93
ATP2A1O14983 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
ATP2A1O14983 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ATP2A1O14983 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ATP2A1O14983 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ATP2A1O14983 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP2A1O14983 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATP2A1O14983 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATP2A1O14983 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP2A1O14983 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP2A1O14983 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP2A1O14983 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.08■■□□□ 1.93
ATP2A1O14983 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.08■■□□□ 1.93
ATP2A1O14983 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
ATP2A1O14983 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATP2A1O14983 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.07■■□□□ 1.92
ATP2A1O14983 MIR6724-1-201ENST00000616420 92 ntBASIC27.07■■□□□ 1.92
ATP2A1O14983 MIR6724-2-201ENST00000616483 92 ntBASIC27.07■■□□□ 1.92
ATP2A1O14983 MIR6724-4-201ENST00000617390 92 ntBASIC27.07■■□□□ 1.92
ATP2A1O14983 MIR6724-3-201ENST00000622482 92 ntBASIC27.07■■□□□ 1.92
ATP2A1O14983 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.06■■□□□ 1.92
ATP2A1O14983 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms