Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDH17O14917 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDH17O14917 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDH17O14917 AC010501.1-201ENST00000606270 1962 ntBASIC22.45■■□□□ 1.18
PCDH17O14917 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH17O14917 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH17O14917 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDH17O14917 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDH17O14917 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDH17O14917 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH17O14917 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDH17O14917 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDH17O14917 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH17O14917 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDH17O14917 PVT1_1.1-201ENST00000615125 194 ntBASIC22.44■■□□□ 1.18
PCDH17O14917 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH17O14917 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDH17O14917 AC103834.1-201ENST00000520383 144 ntBASIC22.43■■□□□ 1.18
PCDH17O14917 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDH17O14917 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH17O14917 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH17O14917 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH17O14917 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 AL035685.1-201ENST00000636663 812 ntBASIC22.42■■□□□ 1.18
PCDH17O14917 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH17O14917 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
PCDH17O14917 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDH17O14917 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH17O14917 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDH17O14917 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH17O14917 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH17O14917 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH17O14917 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDH17O14917 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
PCDH17O14917 AL451085.2-201ENST00000605085 799 ntBASIC22.4■■□□□ 1.18
PCDH17O14917 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH17O14917 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH17O14917 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH17O14917 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH17O14917 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH17O14917 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH17O14917 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PCDH17O14917 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDH17O14917 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH17O14917 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH17O14917 KRT8P33-201ENST00000508125 1423 ntBASIC22.39■■□□□ 1.17
PCDH17O14917 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH17O14917 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH17O14917 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDH17O14917 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH17O14917 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH17O14917 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH17O14917 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDH17O14917 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDH17O14917 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH17O14917 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH17O14917 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH17O14917 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH17O14917 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH17O14917 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH17O14917 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDH17O14917 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH17O14917 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH17O14917 AL031848.2-201ENST00000607670 837 ntBASIC22.35■■□□□ 1.17
PCDH17O14917 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH17O14917 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH17O14917 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH17O14917 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH17O14917 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH17O14917 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDH17O14917 AC103724.3-201ENST00000564481 992 ntBASIC22.34■■□□□ 1.17
PCDH17O14917 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH17O14917 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH17O14917 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDH17O14917 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDH17O14917 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PCDH17O14917 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PCDH17O14917 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH17O14917 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH17O14917 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDH17O14917 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
PCDH17O14917 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH17O14917 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDH17O14917 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH17O14917 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH17O14917 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms