Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 AL035685.1-201ENST00000636663 812 ntBASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 KRT18P24-201ENST00000344739 1156 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 AC009299.2-201ENST00000482477 511 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 THA1P-201ENST00000590384 1145 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 AC120024.1-201ENST00000562672 995 ntBASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SPDYE3A6NKU9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
SPDYE3A6NKU9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 AC011551.1-201ENST00000614101 683 ntBASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SPDYE3A6NKU9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 MIR4281-201ENST00000580852 62 ntBASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 SLC6A10P-202ENST00000431994 2058 ntBASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms