Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AP003733.4-201ENST00000623785 1697 ntBASIC18.82■□□□□ 0.6
CGB1A6NKQ9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CGB1A6NKQ9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGB1A6NKQ9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.81■□□□□ 0.6
CGB1A6NKQ9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CGB1A6NKQ9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CGB1A6NKQ9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.8■□□□□ 0.6
CGB1A6NKQ9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CGB1A6NKQ9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.78■□□□□ 0.6
CGB1A6NKQ9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CGB1A6NKQ9 AC009831.1-201ENST00000580420 1582 ntBASIC18.77■□□□□ 0.6
CGB1A6NKQ9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CGB1A6NKQ9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CGB1A6NKQ9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.77■□□□□ 0.6
CGB1A6NKQ9 LINC01124-201ENST00000409786 2117 ntBASIC18.76■□□□□ 0.59
CGB1A6NKQ9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CGB1A6NKQ9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.75■□□□□ 0.59
CGB1A6NKQ9 RNF126P1-201ENST00000567452 1320 ntBASIC18.74■□□□□ 0.59
CGB1A6NKQ9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.74■□□□□ 0.59
CGB1A6NKQ9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 MIR6089-201ENST00000616698 64 ntBASIC18.73■□□□□ 0.59
CGB1A6NKQ9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CGB1A6NKQ9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 AC133552.2-201ENST00000619106 1032 ntBASIC18.72■□□□□ 0.59
CGB1A6NKQ9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGB1A6NKQ9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGB1A6NKQ9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms