Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RBFOX3A6NFN3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 AC233723.2-201ENST00000623798 2106 ntBASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RBFOX3A6NFN3 LINC00273-201ENST00000539813 1452 ntBASIC18.58■□□□□ 0.57
RBFOX3A6NFN3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RBFOX3A6NFN3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RBFOX3A6NFN3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RBFOX3A6NFN3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.58■□□□□ 0.56
RBFOX3A6NFN3 PKD1P6-201ENST00000343738 4769 ntBASIC18.58■□□□□ 0.56
RBFOX3A6NFN3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RBFOX3A6NFN3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.58■□□□□ 0.56
RBFOX3A6NFN3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 SLC6A10P-202ENST00000431994 2058 ntBASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RBFOX3A6NFN3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RBFOX3A6NFN3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.55■□□□□ 0.56
RBFOX3A6NFN3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RBFOX3A6NFN3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RBFOX3A6NFN3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RBFOX3A6NFN3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RBFOX3A6NFN3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RBFOX3A6NFN3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RBFOX3A6NFN3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RBFOX3A6NFN3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RBFOX3A6NFN3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms