Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
PLEKHD1A6NEE1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC37■■■■□ 3.51
PLEKHD1A6NEE1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
PLEKHD1A6NEE1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC36.99■■■■□ 3.51
PLEKHD1A6NEE1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC36.99■■■■□ 3.51
PLEKHD1A6NEE1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC36.99■■■■□ 3.51
PLEKHD1A6NEE1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC36.98■■■■□ 3.51
PLEKHD1A6NEE1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC36.98■■■■□ 3.51
PLEKHD1A6NEE1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
PLEKHD1A6NEE1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC36.98■■■■□ 3.51
PLEKHD1A6NEE1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC36.97■■■■□ 3.51
PLEKHD1A6NEE1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC36.97■■■■□ 3.51
PLEKHD1A6NEE1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
PLEKHD1A6NEE1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC36.96■■■■□ 3.51
PLEKHD1A6NEE1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
PLEKHD1A6NEE1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC36.96■■■■□ 3.51
PLEKHD1A6NEE1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC36.95■■■■□ 3.51
PLEKHD1A6NEE1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC36.95■■■■□ 3.51
PLEKHD1A6NEE1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC36.95■■■■□ 3.51
PLEKHD1A6NEE1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC36.95■■■■□ 3.51
PLEKHD1A6NEE1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
PLEKHD1A6NEE1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
PLEKHD1A6NEE1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.95■■■■□ 3.5
PLEKHD1A6NEE1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 AC106739.1-201ENST00000617035 715 ntBASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC36.94■■■■□ 3.5
PLEKHD1A6NEE1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
PLEKHD1A6NEE1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
PLEKHD1A6NEE1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC36.93■■■■□ 3.5
PLEKHD1A6NEE1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC36.93■■■■□ 3.5
PLEKHD1A6NEE1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
PLEKHD1A6NEE1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.92■■■■□ 3.5
PLEKHD1A6NEE1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC36.91■■■■□ 3.5
PLEKHD1A6NEE1 ZNRF2P3-201ENST00000424200 374 ntBASIC36.91■■■■□ 3.5
PLEKHD1A6NEE1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC36.91■■■■□ 3.5
PLEKHD1A6NEE1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC36.91■■■■□ 3.5
PLEKHD1A6NEE1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
PLEKHD1A6NEE1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC36.9■■■■□ 3.5
PLEKHD1A6NEE1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
PLEKHD1A6NEE1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
PLEKHD1A6NEE1 PBX2P1-201ENST00000493219 1291 ntBASIC36.89■■■■□ 3.5
PLEKHD1A6NEE1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC36.89■■■■□ 3.5
PLEKHD1A6NEE1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC36.89■■■■□ 3.5
PLEKHD1A6NEE1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
PLEKHD1A6NEE1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC36.88■■■■□ 3.49
PLEKHD1A6NEE1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.49
PLEKHD1A6NEE1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
PLEKHD1A6NEE1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
PLEKHD1A6NEE1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC36.87■■■■□ 3.49
PLEKHD1A6NEE1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC36.87■■■■□ 3.49
PLEKHD1A6NEE1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
PLEKHD1A6NEE1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC36.86■■■■□ 3.49
PLEKHD1A6NEE1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC36.86■■■■□ 3.49
PLEKHD1A6NEE1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
PLEKHD1A6NEE1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
PLEKHD1A6NEE1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
PLEKHD1A6NEE1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC36.84■■■■□ 3.49
PLEKHD1A6NEE1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
PLEKHD1A6NEE1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC36.84■■■■□ 3.49
PLEKHD1A6NEE1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC36.84■■■■□ 3.49
PLEKHD1A6NEE1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
PLEKHD1A6NEE1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
PLEKHD1A6NEE1 RARRES2P6-201ENST00000567333 442 ntBASIC36.83■■■■□ 3.49
PLEKHD1A6NEE1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC36.82■■■■□ 3.49
PLEKHD1A6NEE1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.48
PLEKHD1A6NEE1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC36.82■■■■□ 3.48
PLEKHD1A6NEE1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
PLEKHD1A6NEE1 SNX5-217ENST00000606557 1087 ntBASIC36.82■■■■□ 3.48
PLEKHD1A6NEE1 MIR6722-201ENST00000617286 78 ntBASIC36.82■■■■□ 3.48
PLEKHD1A6NEE1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
PLEKHD1A6NEE1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC36.81■■■■□ 3.48
PLEKHD1A6NEE1 AC142381.2-201ENST00000566120 298 ntBASIC36.81■■■■□ 3.48
PLEKHD1A6NEE1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
PLEKHD1A6NEE1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC36.81■■■■□ 3.48
PLEKHD1A6NEE1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 AL031432.3-201ENST00000607698 485 ntBASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 FOXO3B-201ENST00000395675 1928 ntBASIC36.8■■■■□ 3.48
PLEKHD1A6NEE1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
PLEKHD1A6NEE1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC36.79■■■■□ 3.48
PLEKHD1A6NEE1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC36.79■■■■□ 3.48
PLEKHD1A6NEE1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC36.79■■■■□ 3.48
PLEKHD1A6NEE1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC36.79■■■■□ 3.48
PLEKHD1A6NEE1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 UNC93B3-201ENST00000308076 687 ntBASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 SUDS3P1-201ENST00000505831 966 ntBASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC36.78■■■■□ 3.48
PLEKHD1A6NEE1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms