Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
SBNO1A3KN83 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
SBNO1A3KN83 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.57■■■□□ 2.8
SBNO1A3KN83 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.57■■■□□ 2.8
SBNO1A3KN83 AC106739.1-201ENST00000617035 715 ntBASIC32.57■■■□□ 2.8
SBNO1A3KN83 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SBNO1A3KN83 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SBNO1A3KN83 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SBNO1A3KN83 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SBNO1A3KN83 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SBNO1A3KN83 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.56■■■□□ 2.8
SBNO1A3KN83 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.56■■■□□ 2.8
SBNO1A3KN83 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.56■■■□□ 2.8
SBNO1A3KN83 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
SBNO1A3KN83 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
SBNO1A3KN83 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SBNO1A3KN83 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SBNO1A3KN83 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SBNO1A3KN83 AF131216.4-201ENST00000638924 1588 ntBASIC32.54■■■□□ 2.8
SBNO1A3KN83 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC32.54■■■□□ 2.8
SBNO1A3KN83 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
SBNO1A3KN83 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.53■■■□□ 2.8
SBNO1A3KN83 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SBNO1A3KN83 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
SBNO1A3KN83 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.52■■■□□ 2.8
SBNO1A3KN83 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC32.52■■■□□ 2.8
SBNO1A3KN83 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SBNO1A3KN83 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC32.52■■■□□ 2.8
SBNO1A3KN83 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC32.52■■■□□ 2.8
SBNO1A3KN83 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SBNO1A3KN83 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.51■■■□□ 2.8
SBNO1A3KN83 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SBNO1A3KN83 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC32.51■■■□□ 2.79
SBNO1A3KN83 AC026271.2-201ENST00000428091 497 ntBASIC32.51■■■□□ 2.79
SBNO1A3KN83 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SBNO1A3KN83 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SBNO1A3KN83 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.5■■■□□ 2.79
SBNO1A3KN83 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
SBNO1A3KN83 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SBNO1A3KN83 AL031432.3-201ENST00000607698 485 ntBASIC32.49■■■□□ 2.79
SBNO1A3KN83 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SBNO1A3KN83 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SBNO1A3KN83 TFPT-201ENST00000391757 774 ntTSL 5 BASIC32.48■■■□□ 2.79
SBNO1A3KN83 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SBNO1A3KN83 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SBNO1A3KN83 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SBNO1A3KN83 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
SBNO1A3KN83 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC32.47■■■□□ 2.79
SBNO1A3KN83 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SBNO1A3KN83 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
SBNO1A3KN83 AC142086.6-201ENST00000621154 1765 ntBASIC32.46■■■□□ 2.79
SBNO1A3KN83 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SBNO1A3KN83 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC32.46■■■□□ 2.79
SBNO1A3KN83 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SBNO1A3KN83 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SBNO1A3KN83 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SBNO1A3KN83 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
SBNO1A3KN83 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SBNO1A3KN83 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC32.45■■■□□ 2.79
SBNO1A3KN83 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
SBNO1A3KN83 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.45■■■□□ 2.79
SBNO1A3KN83 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC32.45■■■□□ 2.79
SBNO1A3KN83 AP004609.3-201ENST00000610705 1884 ntBASIC32.44■■■□□ 2.78
SBNO1A3KN83 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SBNO1A3KN83 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC32.44■■■□□ 2.78
SBNO1A3KN83 PBX2P1-201ENST00000493219 1291 ntBASIC32.44■■■□□ 2.78
SBNO1A3KN83 AC142381.2-201ENST00000566120 298 ntBASIC32.44■■■□□ 2.78
SBNO1A3KN83 AC092666.2-201ENST00000613287 246 ntBASIC32.44■■■□□ 2.78
SBNO1A3KN83 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.43■■■□□ 2.78
SBNO1A3KN83 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SBNO1A3KN83 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SBNO1A3KN83 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SBNO1A3KN83 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SBNO1A3KN83 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SBNO1A3KN83 SUDS3P1-201ENST00000505831 966 ntBASIC32.43■■■□□ 2.78
SBNO1A3KN83 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC32.43■■■□□ 2.78
SBNO1A3KN83 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC32.43■■■□□ 2.78
SBNO1A3KN83 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
SBNO1A3KN83 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC32.42■■■□□ 2.78
SBNO1A3KN83 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.42■■■□□ 2.78
SBNO1A3KN83 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC32.42■■■□□ 2.78
SBNO1A3KN83 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SBNO1A3KN83 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
SBNO1A3KN83 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
SBNO1A3KN83 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.41■■■□□ 2.78
SBNO1A3KN83 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC32.41■■■□□ 2.78
SBNO1A3KN83 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC32.41■■■□□ 2.78
SBNO1A3KN83 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.41■■■□□ 2.78
SBNO1A3KN83 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
SBNO1A3KN83 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC32.39■■■□□ 2.78
SBNO1A3KN83 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.39■■■□□ 2.78
SBNO1A3KN83 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
SBNO1A3KN83 AC135279.3-201ENST00000610945 1311 ntBASIC32.39■■■□□ 2.78
SBNO1A3KN83 CLTA-206ENST00000466396 695 ntTSL 2 BASIC32.39■■■□□ 2.78
SBNO1A3KN83 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC32.39■■■□□ 2.78
SBNO1A3KN83 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
SBNO1A3KN83 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SBNO1A3KN83 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SBNO1A3KN83 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
SBNO1A3KN83 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms