Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ZNRF2P3-201ENST00000424200 374 ntBASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 AC142381.2-201ENST00000566120 298 ntBASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 MIR6722-201ENST00000617286 78 ntBASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC163A0A0D9SF12 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC163A0A0D9SF12 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC163A0A0D9SF12 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC163A0A0D9SF12 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC163A0A0D9SF12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC163A0A0D9SF12 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC163A0A0D9SF12 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC163A0A0D9SF12 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 SUDS3P1-201ENST00000505831 966 ntBASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC163A0A0D9SF12 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC163A0A0D9SF12 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 AC092666.2-201ENST00000613287 246 ntBASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 AP004609.3-201ENST00000610705 1884 ntBASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC163A0A0D9SF12 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC163A0A0D9SF12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC163A0A0D9SF12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.63■■□□□ 1.37
CCDC163A0A0D9SF12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 AC026271.2-201ENST00000428091 497 ntBASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 AL031432.3-201ENST00000607698 485 ntBASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC163A0A0D9SF12 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 UNC93B3-201ENST00000308076 687 ntBASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 EDA-201ENST00000338901 1233 ntBASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 SNX5-217ENST00000606557 1087 ntBASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC163A0A0D9SF12 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC163A0A0D9SF12 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC163A0A0D9SF12 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.6■■□□□ 1.37
CCDC163A0A0D9SF12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC163A0A0D9SF12 AC135279.3-201ENST00000610945 1311 ntBASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 AL136162.1-201ENST00000607711 1078 ntBASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC163A0A0D9SF12 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CCDC163A0A0D9SF12 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC163A0A0D9SF12 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.58■■□□□ 1.37
CCDC163A0A0D9SF12 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.58■■□□□ 1.36
CCDC163A0A0D9SF12 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 MIR5787-201ENST00000611784 55 ntBASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 AL355001.2-201ENST00000620617 1191 ntBASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC163A0A0D9SF12 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.56■■□□□ 1.36
CCDC163A0A0D9SF12 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 FOXO3B-201ENST00000395675 1928 ntBASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 AC104564.3-201ENST00000582367 638 ntBASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CCDC163A0A0D9SF12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC163A0A0D9SF12 SRD5A1P1-201ENST00000442297 786 ntBASIC23.54■■□□□ 1.36
CCDC163A0A0D9SF12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms