Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 MIR6724-1-201ENST00000616420 92 ntBASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 MIR6724-2-201ENST00000616483 92 ntBASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 MIR6724-4-201ENST00000617390 92 ntBASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 MIR6724-3-201ENST00000622482 92 ntBASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV17A0A0B4J275 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV17A0A0B4J275 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRAV17A0A0B4J275 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV17A0A0B4J275 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 AL356740.2-201ENST00000601559 647 ntBASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 AL117332.1-201ENST00000622628 974 ntBASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV17A0A0B4J275 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 AC131281.2-201ENST00000520478 145 ntBASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 MIR3621-201ENST00000580529 85 ntBASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV17A0A0B4J275 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV17A0A0B4J275 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRAV17A0A0B4J275 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRAV17A0A0B4J275 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAV17A0A0B4J275 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAV17A0A0B4J275 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV17A0A0B4J275 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAV17A0A0B4J275 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRAV17A0A0B4J275 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRAV17A0A0B4J275 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 AF131216.4-201ENST00000638924 1588 ntBASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV17A0A0B4J275 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRAV17A0A0B4J275 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 AL136116.3-201ENST00000402907 1138 ntBASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRAV17A0A0B4J275 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRAV17A0A0B4J275 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms