Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX49Q9Y6V7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC074386.1-202ENST00000463561 864 ntBASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CXCL1P1-201ENST00000502804 216 ntBASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 GGTLC5P-201ENST00000617623 998 ntBASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC092902.6-201ENST00000641783 218 ntBASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX49Q9Y6V7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DDX49Q9Y6V7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms