Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNRNP25Q9BV90 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 HLA-H-201ENST00000383620 1096 ntBASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 AC093520.2-201ENST00000561830 333 ntBASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNRNP25Q9BV90 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AL627223.1-201ENST00000416693 442 ntBASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 FAM58DP-201ENST00000428076 619 ntBASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AC005237.2-201ENST00000434368 219 ntBASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AP000344.2-201ENST00000512987 629 ntBASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 AP3S2-216ENST00000617003 1561 ntBASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SNRNP25Q9BV90 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 AC134407.2-201ENST00000625089 1978 ntBASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRNP25Q9BV90 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms