Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.16■□□□□ 0.34
RAD9AQ99638 AC243960.2-201ENST00000600996 747 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.16■□□□□ 0.34
RAD9AQ99638 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.16■□□□□ 0.34
RAD9AQ99638 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAD9AQ99638 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
RAD9AQ99638 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
RAD9AQ99638 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RAD9AQ99638 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RAD9AQ99638 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC074338.1-201ENST00000416825 156 ntBASIC17.15■□□□□ 0.34
RAD9AQ99638 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.15■□□□□ 0.34
RAD9AQ99638 FTH1P14-201ENST00000482930 551 ntBASIC17.15■□□□□ 0.34
RAD9AQ99638 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.15■□□□□ 0.34
RAD9AQ99638 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC243562.2-201ENST00000561247 970 ntBASIC17.15■□□□□ 0.34
RAD9AQ99638 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.15■□□□□ 0.34
RAD9AQ99638 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAD9AQ99638 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
RAD9AQ99638 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAD9AQ99638 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAD9AQ99638 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.14■□□□□ 0.33
RAD9AQ99638 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAD9AQ99638 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 C1QBPP1-201ENST00000400117 770 ntBASIC17.14■□□□□ 0.33
RAD9AQ99638 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.14■□□□□ 0.33
RAD9AQ99638 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.14■□□□□ 0.33
RAD9AQ99638 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.14■□□□□ 0.33
RAD9AQ99638 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 CLUHP6-201ENST00000580789 941 ntBASIC17.14■□□□□ 0.33
RAD9AQ99638 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAD9AQ99638 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
RAD9AQ99638 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 AC139713.2-201ENST00000641328 2723 ntBASIC17.14■□□□□ 0.33
RAD9AQ99638 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.14■□□□□ 0.33
RAD9AQ99638 AC134312.5-201ENST00000568031 1313 ntBASIC17.14■□□□□ 0.33
RAD9AQ99638 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RAD9AQ99638 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 FZD10-202ENST00000539839 3282 ntBASIC17.14■□□□□ 0.33
RAD9AQ99638 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAD9AQ99638 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms