Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 FAM197Y3-203ENST00000618346 717 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 LINC01144-201ENST00000626198 1710 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 AC012569.1-201ENST00000591191 1524 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.89□□□□□ -0.51
MUC4Q99102 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 RPS2P28-201ENST00000314255 741 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.89□□□□□ -0.51
MUC4Q99102 AC009947.1-201ENST00000444350 727 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 KRT18P3-201ENST00000451602 1288 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.89□□□□□ -0.51
MUC4Q99102 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.89□□□□□ -0.51
MUC4Q99102 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
MUC4Q99102 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 AL596442.2-201ENST00000610240 980 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 AP002414.2-201ENST00000591780 3365 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 AC008677.1-201ENST00000519230 1561 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MUC4Q99102 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MUC4Q99102 AC092919.2-201ENST00000623631 1645 ntBASIC11.89□□□□□ -0.51
MUC4Q99102 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 AC016027.1-202ENST00000607927 1699 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 MIR648-201ENST00000385046 94 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 HMGA1P7-201ENST00000406908 502 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 VN2R19P-201ENST00000442399 1052 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.88□□□□□ -0.51
MUC4Q99102 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 AL096865.1-201ENST00000606796 927 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 AC079781.4-201ENST00000641908 219 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MUC4Q99102 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 AC007274.1-201ENST00000439805 662 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MUC4Q99102 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.88□□□□□ -0.51
MUC4Q99102 Z83851.2-201ENST00000609564 659 ntBASIC11.88□□□□□ -0.51
MUC4Q99102 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.88□□□□□ -0.51
MUC4Q99102 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.88□□□□□ -0.51
MUC4Q99102 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms