Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC112907.2-201ENST00000448639 330 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC092647.4-201ENST00000457211 535 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 RNF126P1-202ENST00000569893 925 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC011840.4-201ENST00000578471 627 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AL592071.1-201ENST00000611956 408 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AC092364.2-201ENST00000596710 2692 ntBASIC12.35□□□□□ -0.43
AP1S3Q96PC3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP1S3Q96PC3 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AL645728.1-201ENST00000366221 2101 ntBASIC12.34□□□□□ -0.43
AP1S3Q96PC3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AL137013.1-201ENST00000432946 1228 ntBASIC12.34□□□□□ -0.43
AP1S3Q96PC3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 VENTXP7-201ENST00000475503 772 ntBASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 TMEM191A-211ENST00000637163 1067 ntBASIC12.34□□□□□ -0.43
AP1S3Q96PC3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP1S3Q96PC3 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
AP1S3Q96PC3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.33□□□□□ -0.44
AP1S3Q96PC3 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms