Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 AC005622.1-201ENST00000636801 1703 ntBASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
FOXRED1Q96CU9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 AL121894.2-201ENST00000602977 491 ntBASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 LINC02228-204ENST00000642115 2962 ntBASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXRED1Q96CU9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC016027.1-202ENST00000607927 1699 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 RPS2P28-201ENST00000314255 741 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 KRT18P67-201ENST00000432816 1264 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC079781.3-201ENST00000449110 356 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC107918.2-201ENST00000530817 355 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AP002469.2-201ENST00000531724 424 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 MTDHP4-201ENST00000600287 670 ntBASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXRED1Q96CU9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms