Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3IL1Q8TBN0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 TSSC2-201ENST00000450217 709 ntBASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AC087641.1-201ENST00000557561 1021 ntBASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AC116407.4-201ENST00000623319 1061 ntBASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.25■□□□□ 0.19
RAB3IL1Q8TBN0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 SSR4P1-203ENST00000599569 2260 ntBASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 PMS2P1-201ENST00000431037 1228 ntBASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 AC064862.7-201ENST00000604520 867 ntBASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3IL1Q8TBN0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB3IL1Q8TBN0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms