Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 AL049840.3-201ENST00000602669 611 ntBASIC13.57□□□□□ -0.24
COMMD1Q8N668 Z83851.2-201ENST00000609564 659 ntBASIC13.57□□□□□ -0.24
COMMD1Q8N668 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.57□□□□□ -0.24
COMMD1Q8N668 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COMMD1Q8N668 OR2I1P-209ENST00000641730 5365 ntBASIC13.57□□□□□ -0.24
COMMD1Q8N668 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GPR89P-201ENST00000407924 1495 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 AC007292.2-201ENST00000593524 1812 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 HLA-J-202ENST00000469281 1241 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GGTLC5P-201ENST00000617623 998 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 AF228730.7-201ENST00000641842 219 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 AC097637.2-201ENST00000624096 1997 ntBASIC13.56□□□□□ -0.24
COMMD1Q8N668 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.56□□□□□ -0.24
COMMD1Q8N668 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD1Q8N668 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
COMMD1Q8N668 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD1Q8N668 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD1Q8N668 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD1Q8N668 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.55□□□□□ -0.24
COMMD1Q8N668 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD1Q8N668 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD1Q8N668 SBF1P1-201ENST00000444527 5631 ntBASIC13.55□□□□□ -0.24
COMMD1Q8N668 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD1Q8N668 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms