Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AC112504.1-201ENST00000623415 1841 ntBASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AL590627.1-203ENST00000421194 1026 ntBASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AC140658.5-201ENST00000438532 169 ntBASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 LINC00554-201ENST00000564841 3011 ntBASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC00346Q8IVM7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 MIR648-201ENST00000385046 94 ntBASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AC092474.2-201ENST00000424288 719 ntBASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AC093724.1-201ENST00000448659 1027 ntBASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AC069224.1-201ENST00000566372 1715 ntBASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00346Q8IVM7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00346Q8IVM7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00346Q8IVM7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00346Q8IVM7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00346Q8IVM7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms