Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.04■□□□□ 0.8
COL23A1Q86Y22 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL23A1Q86Y22 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 IMP3P2-201ENST00000489760 475 ntBASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AC026410.3-201ENST00000514280 936 ntBASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AC097724.1-201ENST00000609581 426 ntBASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AC009053.2-201ENST00000563701 2365 ntBASIC20.03■□□□□ 0.8
COL23A1Q86Y22 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL23A1Q86Y22 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 MIR1202-201ENST00000408529 83 ntBASIC20.02■□□□□ 0.8
COL23A1Q86Y22 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AC000095.1-201ENST00000603208 874 ntBASIC20.02■□□□□ 0.8
COL23A1Q86Y22 AL451050.2-201ENST00000606967 682 ntBASIC20.02■□□□□ 0.8
COL23A1Q86Y22 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL23A1Q86Y22 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms