Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 AC114501.2-201ENST00000439631 535 ntBASIC18.03■□□□□ 0.48
TRIM50Q86XT4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 DOC2GP-202ENST00000514950 1163 ntBASIC18.03■□□□□ 0.48
TRIM50Q86XT4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 WASH4P-201ENST00000564273 1246 ntBASIC18.03■□□□□ 0.48
TRIM50Q86XT4 TP53TG3HP-202ENST00000569755 579 ntBASIC18.03■□□□□ 0.48
TRIM50Q86XT4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM50Q86XT4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 AGGF1P2-201ENST00000426656 2106 ntBASIC18.02■□□□□ 0.48
TRIM50Q86XT4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 NME2P1-201ENST00000426182 414 ntBASIC18.02■□□□□ 0.48
TRIM50Q86XT4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 AC140912.1-201ENST00000577171 1054 ntBASIC18.02■□□□□ 0.48
TRIM50Q86XT4 AC004461.2-201ENST00000629517 803 ntBASIC18.02■□□□□ 0.48
TRIM50Q86XT4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.02■□□□□ 0.48
TRIM50Q86XT4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRIM50Q86XT4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 CHCHD2P3-201ENST00000603038 451 ntBASIC18.01■□□□□ 0.47
TRIM50Q86XT4 AL365330.1-201ENST00000607459 531 ntBASIC18.01■□□□□ 0.47
TRIM50Q86XT4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRIM50Q86XT4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms