Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.12■□□□□ 0.81
UBE3BQ7Z3V4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 AC006449.6-201ENST00000612330 2296 ntBASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 AZGP1P1-201ENST00000411909 902 ntBASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBE3BQ7Z3V4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 EEF1DP4-201ENST00000446006 880 ntBASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 AC134407.2-201ENST00000625089 1978 ntBASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 KRT8P37-201ENST00000451609 1420 ntBASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBE3BQ7Z3V4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 OR6D1P-203ENST00000641209 4860 ntBASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 RN7SL692P-201ENST00000464677 288 ntBASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AL596325.1-201ENST00000563991 1082 ntBASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.09■□□□□ 0.81
UBE3BQ7Z3V4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms