Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.07■□□□□ 0
CHMP1BQ7LBR1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 YBX1P5-201ENST00000509441 847 ntBASIC15.07■□□□□ 0
CHMP1BQ7LBR1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
CHMP1BQ7LBR1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AC060834.1-201ENST00000443027 2032 ntBASIC15.06■□□□□ 0
CHMP1BQ7LBR1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AL671277.1-201ENST00000429656 993 ntBASIC15.06■□□□□ 0
CHMP1BQ7LBR1 DNAJB3-202ENST00000449667 1266 ntBASIC15.06■□□□□ 0
CHMP1BQ7LBR1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 AC092919.2-201ENST00000623631 1645 ntBASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CHMP1BQ7LBR1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 AC092053.1-201ENST00000605787 1936 ntBASIC15.05■□□□□ 0
CHMP1BQ7LBR1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CHMP1BQ7LBR1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.05■□□□□ -0
CHMP1BQ7LBR1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms