Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00299Q6ZSB3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AC107918.4-201ENST00000641966 3141 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AC011474.4-201ENST00000623523 2076 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AC245100.5-201ENST00000452108 331 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AC091167.2-201ENST00000579581 588 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 GPR32P1-201ENST00000601788 811 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AL138831.2-201ENST00000606564 490 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 REXO1L10P-201ENST00000615707 1290 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 REXO1L12P-201ENST00000622156 912 ntBASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LINC00299Q6ZSB3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AL591122.2-201ENST00000624125 1853 ntBASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AC022517.1-201ENST00000592429 346 ntBASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 CICP8-201ENST00000455800 2813 ntBASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms